Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AP001596.2-201ENST00000608410 312 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 AC008873.1-201ENST00000625051 138 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 snoZ196.1-201ENST00000625269 89 ntBASIC0.48□□□□□ -2.33
HDGFL3Q9Y3E1 MTND4P5-201ENST00000435821 1374 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-1240P-201ENST00000365155 104 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-195P-201ENST00000411352 109 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 AC008134.1-201ENST00000420943 193 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-221P-201ENST00000459541 99 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-612P-201ENST00000516909 102 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 AL162424.1-201ENST00000602325 221 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 AC106754.1-201ENST00000562632 1513 ntBASIC0.47□□□□□ -2.33
HDGFL3Q9Y3E1 RNU6-227P-201ENST00000362865 103 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-199P-201ENST00000362954 107 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 Z99497.1-201ENST00000421282 135 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AC098869.1-201ENST00000481627 292 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 MTATP6P9-201ENST00000515039 680 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 MTND2P32-201ENST00000521584 1038 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AL391834.2-201ENST00000609982 546 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AC004223.4-201ENST00000612426 332 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 AC139792.3-201ENST00000623525 224 ntBASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
HDGFL3Q9Y3E1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AL355796.1-201ENST00000406706 323 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 RNA5SP494-201ENST00000410653 129 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 RNA5SP247-201ENST00000411181 105 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AL035398.1-201ENST00000430869 322 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 RPL39P5-202ENST00000512505 151 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AC105417.1-201ENST00000514691 285 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-947P-201ENST00000516264 106 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AC007834.2-201ENST00000536310 343 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 MIR548AB-201ENST00000584917 84 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AL512605.2-201ENST00000592972 256 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AL357312.1-201ENST00000603879 298 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 AC025449.1-201ENST00000603896 529 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 SNRPGP20-201ENST00000604477 205 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 Z84480.1-201ENST00000605131 311 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 MIR98-201ENST00000606724 119 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 CASC19-280ENST00000642102 1351 ntBASIC0.45□□□□□ -2.34
HDGFL3Q9Y3E1 Y_RNA.116-201ENST00000363292 103 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-1214P-201ENST00000363650 109 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-1286P-201ENST00000383871 107 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-606P-201ENST00000384721 111 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-1106P-201ENST00000390845 107 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 AL451046.2-201ENST00000403074 277 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RNU2-29P-201ENST00000410423 189 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 AL593851.1-201ENST00000426171 157 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RPL31P35-201ENST00000431058 377 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 CETN4P-201ENST00000432407 469 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 AC022364.2-201ENST00000457963 554 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RNU7-90P-201ENST00000459216 62 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 BET1P1-201ENST00000482276 359 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 AC025465.4-201ENST00000513422 638 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-917P-201ENST00000516294 104 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 MIR4778-201ENST00000577635 80 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 AL078596.1-201ENST00000624856 447 ntBASIC0.44□□□□□ -2.34
HDGFL3Q9Y3E1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNU4-28P-201ENST00000364739 141 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNU1-133P-201ENST00000364867 167 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNU4-12P-201ENST00000365233 139 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 FABP5P4-201ENST00000437203 171 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RPL39P39-201ENST00000455840 151 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-1037P-201ENST00000459571 107 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNU7-99P-201ENST00000516271 62 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 RNU6-344P-201ENST00000516635 111 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 MRPS36P3-201ENST00000519284 130 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 AL137161.1-201ENST00000532231 390 ntBASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.43□□□□□ -2.34
HDGFL3Q9Y3E1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms