Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HMGB3P2-201ENST00000411913 584 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 AL353752.1-201ENST00000454946 260 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 AC145146.1-201ENST00000496370 254 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 CYCSP26-201ENST00000534107 320 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 AC016727.2-201ENST00000603988 621 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 PCGEM1.1-201ENST00000613431 131 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 MIR219B-201ENST00000637023 88 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 MTND5P16-201ENST00000460269 1703 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 MIR6073-201ENST00000352083 89 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 RNU6-874P-201ENST00000362390 105 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.158-201ENST00000363651 101 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.162-201ENST00000363683 102 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.358-201ENST00000365491 99 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.526-201ENST00000384572 110 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 AL160004.2-201ENST00000432935 350 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 RPS15AP28-201ENST00000435088 386 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 AL118496.2-201ENST00000448300 230 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 EIF4A1P12-201ENST00000551910 141 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 AC006600.1-201ENST00000572529 153 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 MIR3126-201ENST00000577443 74 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 AC025754.2-201ENST00000606491 432 ntBASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDK11AQ9UQ88 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 RNU6-280P-201ENST00000364145 104 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 Y_RNA.424-201ENST00000384063 103 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 MIR606-201ENST00000384851 96 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 AC007215.1-201ENST00000464893 276 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 RNU6-1114P-201ENST00000516022 107 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 RNU6-58P-201ENST00000517143 103 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 Y_RNA.721-201ENST00000517207 102 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 RNU6-586P-201ENST00000517265 104 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 AC027288.2-201ENST00000553028 243 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 AL132822.1-201ENST00000617063 513 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 AC012640.5-201ENST00000623897 319 ntBASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDK11AQ9UQ88 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 RNU6-378P-201ENST00000384324 107 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 RNU6-1160P-201ENST00000384546 104 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 SNORA64-201ENST00000384674 134 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 MIR221-201ENST00000385135 110 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 RNU1-139P-201ENST00000391307 165 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 AC096644.2-201ENST00000429278 159 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 AP000870.1-201ENST00000472927 406 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 MYL12BP1-201ENST00000569826 507 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 SNRPGP20-201ENST00000604477 205 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 PART1_1.1-201ENST00000611761 217 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 MIR6766-201ENST00000622641 72 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 AC138305.3-201ENST00000624988 240 ntBASIC3.51□□□□□ -1.85
CDK11AQ9UQ88 RNY3P11-201ENST00000364153 102 ntBASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 SNORA46.1-201ENST00000391069 153 ntBASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 SNORD23.1-201ENST00000408212 104 ntBASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 RNU6-991P-201ENST00000516168 107 ntBASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 AC026470.2-201ENST00000561492 181 ntBASIC3.5□□□□□ -1.85
CDK11AQ9UQ88 MTND4P1-201ENST00000457501 1466 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 SNORD14.1-201ENST00000365609 90 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 Y_RNA.557-201ENST00000384680 107 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 RNU6-159P-201ENST00000391080 106 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 AC093852.1-201ENST00000503587 266 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 RNA5SP200-201ENST00000516360 103 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 RNU7-193P-201ENST00000516723 65 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 RPS29P30-201ENST00000600975 111 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 RPL17P51-201ENST00000605218 238 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 SNORD58B-201ENST00000607313 66 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 BX322639.1-202ENST00000423987 2213 ntBASIC3.49□□□□□ -1.85
CDK11AQ9UQ88 ZNF72P-201ENST00000425869 1908 ntBASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 RNU6-222P-201ENST00000362438 107 ntBASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 RNU6-101P-201ENST00000410323 104 ntBASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 AC112492.4-201ENST00000456549 352 ntBASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 MIR5188-201ENST00000583467 113 ntBASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 MIR6895-201ENST00000613497 78 ntBASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 AC005296.1-201ENST00000616145 209 ntBASIC3.48□□□□□ -1.85
CDK11AQ9UQ88 AC091812.1-201ENST00000432235 1948 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 MIR21-201ENST00000362134 72 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 SNORA25B-201ENST00000365507 128 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 RNU6-245P-201ENST00000384020 107 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 EDDM3CP-201ENST00000415977 425 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 WARS2P1-201ENST00000429678 537 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 CHEK2P4-201ENST00000450340 246 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 AC107032.1-201ENST00000485945 480 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 AC132942.1-201ENST00000486753 483 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 RNA5SP82-201ENST00000516707 92 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 AC022868.1-201ENST00000517767 391 ntBASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.47□□□□□ -1.85
CDK11AQ9UQ88 AC022616.4-201ENST00000522985 181 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms