Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AC244098.3-201ENST00000424803 96 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AC079140.5-201ENST00000507882 310 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AC023827.1-201ENST00000569247 97 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AC131055.1-201ENST00000584626 316 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AP000907.4-201ENST00000604143 237 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 MIR6734-201ENST00000621166 68 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AL078596.1-201ENST00000624856 447 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 AL589743.1-201ENST00000551932 2712 ntBASIC0.19□□□□□ -2.38
VPS29Q9UBQ0 MIRLET7D-201ENST00000362263 87 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 Y_RNA.226-201ENST00000364337 114 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RNY1P14-201ENST00000384426 108 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RNU6-83P-201ENST00000384568 112 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RNU6-1067P-201ENST00000384752 107 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 MIR1287-201ENST00000408492 90 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RNA5SP222-201ENST00000411039 105 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RPS26P42-201ENST00000413485 326 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RPL23AP50-201ENST00000434149 455 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RNU7-94P-201ENST00000459576 63 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RNA5SP436-201ENST00000516020 115 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RNU6-1110P-201ENST00000516462 101 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC022868.1-201ENST00000517767 391 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC011195.1-201ENST00000578177 177 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC005771.1-201ENST00000585581 349 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 RSL24D1P11-201ENST00000591045 491 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC112191.3-201ENST00000604371 277 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC022709.1-201ENST00000615967 87 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 AC009878.1-201ENST00000621819 340 ntBASIC0.18□□□□□ -2.38
VPS29Q9UBQ0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AC090625.1-201ENST00000357130 210 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-501P-201ENST00000364072 100 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-266P-201ENST00000364225 107 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-169P-201ENST00000365336 107 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-42P-201ENST00000384165 107 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-424P-201ENST00000384367 105 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-393P-201ENST00000384475 107 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU4-46P-201ENST00000410818 138 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AC106883.1-201ENST00000418805 562 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 CALM2P4-201ENST00000430810 426 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 EPS15P1-201ENST00000448836 336 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 snoU13.25-201ENST00000458945 104 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-221P-201ENST00000459541 99 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 MTND5P16-201ENST00000460269 1703 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 OR9P1P-201ENST00000496431 281 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU2-69P-201ENST00000516061 100 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AC109810.1-201ENST00000534066 224 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 PCMTD1P2-201ENST00000565017 355 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 SNORA4-201ENST00000584302 138 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RMST_2.1-201ENST00000617263 136 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AC008873.1-201ENST00000625051 138 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 AC100810.6-201ENST00000638068 285 ntBASIC0.17□□□□□ -2.38
VPS29Q9UBQ0 RNU6-434P-201ENST00000384376 107 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AL365184.2-201ENST00000431139 435 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AL596276.1-201ENST00000434465 418 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AL162725.1-201ENST00000435405 301 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AC104332.1-201ENST00000440471 797 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AC010493.1-201ENST00000513479 292 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 RNU7-99P-201ENST00000516271 62 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 MTND4LP26-201ENST00000518144 282 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AC004223.2-201ENST00000590309 544 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AP000811.1-201ENST00000603803 651 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 AC099654.13-201ENST00000639774 207 ntBASIC0.16□□□□□ -2.38
VPS29Q9UBQ0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 Y_RNA.238-201ENST00000364441 102 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 RNY1P8-201ENST00000383970 114 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 RNU6-1200P-201ENST00000384162 107 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 U8.16-201ENST00000391279 133 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 RNA5SP504-201ENST00000410676 117 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AC084290.1-201ENST00000434995 374 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 RPS20P10-201ENST00000451209 253 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AC093850.1-201ENST00000454121 251 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 TPT1P7-201ENST00000458300 517 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 RNU6-410P-201ENST00000517006 107 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AC069113.1-201ENST00000517763 267 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AC090572.1-201ENST00000519251 160 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AC068790.2-201ENST00000602601 557 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AC018714.1-201ENST00000605028 208 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AL157392.4-201ENST00000609756 345 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
VPS29Q9UBQ0 AL136317.1-201ENST00000612653 226 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms