Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
CPSF2Q9P2I0 AC010900.2-201ENST00000604508 210 ntBASIC1.92□□□□□ -2.1
CPSF2Q9P2I0 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
CPSF2Q9P2I0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.92□□□□□ -2.1
CPSF2Q9P2I0 AL078596.1-201ENST00000624856 447 ntBASIC1.92□□□□□ -2.1
CPSF2Q9P2I0 AC245060.5-201ENST00000610778 3293 ntBASIC1.92□□□□□ -2.1
CPSF2Q9P2I0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 MIR449A-201ENST00000362113 91 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 MIR126-201ENST00000362291 85 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 RNU1-62P-201ENST00000362599 164 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 RNU6-862P-201ENST00000362804 105 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 RNU6-997P-201ENST00000384725 107 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AL117342.1-201ENST00000404861 406 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 RPL21P111-201ENST00000418453 477 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 NCOR1P3-201ENST00000420479 303 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 MTND3P23-201ENST00000431980 347 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 RBMX2P4-201ENST00000441256 376 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AC103851.1-201ENST00000506833 274 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 RNU6-948P-201ENST00000516374 107 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 Y_RNA.708-201ENST00000516950 96 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 MIR4285-201ENST00000581001 85 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AL355802.3-201ENST00000607571 545 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AC005014.2-201ENST00000607795 599 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AC009229.3-201ENST00000608056 282 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 AL353149.1-201ENST00000610667 244 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 uc_338.5-201ENST00000611839 155 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
CPSF2Q9P2I0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.482-201ENST00000384377 111 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 MIR10B-201ENST00000385011 110 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 RNU2-2P-201ENST00000410396 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 USMG5P1-201ENST00000425964 177 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 AC074290.1-201ENST00000448883 135 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 MTND3P10-201ENST00000450967 341 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 RPL31P58-201ENST00000469001 379 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 AC091179.3-201ENST00000474761 144 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 AC008549.1-201ENST00000512900 643 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.691-201ENST00000516611 103 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 SNORA31.17-201ENST00000516953 127 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 MIR5701-3-201ENST00000578890 82 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 MIR5701-1-201ENST00000585138 82 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 AC069114.2-201ENST00000604699 304 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.15-201ENST00000611544 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.16-201ENST00000613119 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.12-201ENST00000613778 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.20-201ENST00000613956 192 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.9-201ENST00000615427 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 MIR5701-2-201ENST00000615634 82 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.11-201ENST00000616345 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.2-201ENST00000616535 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.3-201ENST00000617785 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.19-201ENST00000618602 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 RNU2-1-201ENST00000618664 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.6-201ENST00000619225 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.5-201ENST00000619465 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 U2.10-201ENST00000620268 191 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 AC068205.3-201ENST00000636385 468 ntBASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.9□□□□□ -2.11
CPSF2Q9P2I0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.2-201ENST00000362330 96 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU6-222P-201ENST00000362438 107 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU6-280P-201ENST00000364145 104 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 AL033519.2-201ENST00000403958 392 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RN7SKP192-201ENST00000411291 327 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU6-57P-201ENST00000411348 103 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU1-98P-201ENST00000458992 160 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU7-57P-201ENST00000459540 60 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 MTND4P17-201ENST00000470444 350 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RPL7P42-201ENST00000481005 679 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNU6-970P-201ENST00000516312 107 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 RNA5SP384-201ENST00000516615 116 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 Y_RNA.706-201ENST00000516933 99 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 CBX3P4-201ENST00000538909 354 ntBASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
CPSF2Q9P2I0 AC100812.1-201ENST00000607622 580 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms