Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC026470.2-201ENST00000561492 181 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 MIR4753-201ENST00000585119 83 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 RNU6-89P-201ENST00000606519 100 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 AF250324.2-201ENST00000608299 610 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 FAM157A-202ENST00000615155 405 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 AC091895.1-201ENST00000624494 256 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 AL359697.1-201ENST00000624879 587 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 MIR338-201ENST00000636369 67 ntBASIC1.22□□□□□ -2.21
KLHL28Q9NXS3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.436-201ENST00000384097 102 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 SNORA29-201ENST00000384183 140 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 RPS26P42-201ENST00000413485 326 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 EIF1P1-201ENST00000421436 341 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 AC025465.4-201ENST00000513422 638 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 SNORA19.2-201ENST00000516013 114 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 AC087854.1-201ENST00000519706 414 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.21□□□□□ -2.22
KLHL28Q9NXS3 OR4G1P-203ENST00000641984 1631 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.231-201ENST00000364358 102 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 RNU6-908P-201ENST00000410160 94 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AL589823.1-201ENST00000429577 183 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 MRPS10P2-201ENST00000431226 381 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC015922.2-201ENST00000435593 184 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC073910.1-201ENST00000445047 438 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 MTCYBP18-201ENST00000501056 747 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1281P-201ENST00000516223 105 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 RNU6-948P-201ENST00000516374 107 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1332P-201ENST00000516666 104 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 RAB11AP2-201ENST00000545905 639 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AL157687.1-201ENST00000554853 619 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC010525.2-201ENST00000590920 195 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC016727.2-201ENST00000603988 621 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 AC073534.2-201ENST00000620377 381 ntBASIC1.2□□□□□ -2.22
KLHL28Q9NXS3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.38-201ENST00000362617 102 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 SNORA72.2-201ENST00000365028 127 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 RNU6-331P-201ENST00000384724 107 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.615-201ENST00000410769 117 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC004386.2-201ENST00000441858 148 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AL359672.1-201ENST00000442302 409 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 MTND1P1-201ENST00000445453 368 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 MTCO2P7-201ENST00000446518 666 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 RNU6-498P-201ENST00000459468 107 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 U8.21-201ENST00000459536 136 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 HMGN1P7-201ENST00000491722 313 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC091885.1-201ENST00000506658 268 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 MRPS36P4-201ENST00000534436 298 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC245505.1-201ENST00000556398 224 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 MIR5006-201ENST00000583027 110 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC104458.1-201ENST00000608243 463 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC093783.1-201ENST00000612976 329 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 AC068137.3-201ENST00000639191 341 ntBASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KLHL28Q9NXS3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RNU6-975P-201ENST00000384296 105 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 MIR549A-201ENST00000385268 96 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 EIF4E2P1-201ENST00000393781 255 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RNA5SP494-201ENST00000410653 129 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RNU6-325P-201ENST00000411132 105 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AC004866.1-201ENST00000411748 78 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RPL37P10-201ENST00000412884 288 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 COX6CP10-201ENST00000416832 224 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 TOMM22P2-201ENST00000430735 237 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 ERLEC1P1-201ENST00000433806 578 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AC009237.7-201ENST00000447357 229 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AC114982.1-201ENST00000469402 321 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.665-201ENST00000516177 98 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 SCOCP1-201ENST00000554676 349 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms