Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
MKS1Q9NXB0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 SNORD63-201ENST00000384262 68 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 RNU6-937P-201ENST00000384325 106 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 MIR568-201ENST00000385036 95 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 MIR524-201ENST00000385242 87 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 SNORD115-46-201ENST00000390982 71 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 RNU2-20P-201ENST00000410425 191 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 RNU6-121P-201ENST00000410525 99 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 RNU5A-5P-201ENST00000411054 116 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 AL137159.1-201ENST00000452808 512 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 AC114982.1-201ENST00000469402 321 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 AC093259.1-201ENST00000509755 300 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 RNA5SP82-201ENST00000516707 92 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.81□□□□□ -1.96
MKS1Q9NXB0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.81□□□□□ -1.96
MKS1Q9NXB0 AC005176.2-201ENST00000596933 147 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 MIR3674-201ENST00000636576 68 ntBASIC2.81□□□□□ -1.96
MKS1Q9NXB0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MKS1Q9NXB0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
MKS1Q9NXB0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
MKS1Q9NXB0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MKS1Q9NXB0 SNORA38-201ENST00000363946 132 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 RNU6-851P-201ENST00000384565 107 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 MIR34B-201ENST00000385076 84 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 RNA5SP475-201ENST00000410568 110 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 AC074290.1-201ENST00000448883 135 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 RPL7P49-201ENST00000471402 708 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 RNU6-826P-201ENST00000516827 104 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.8□□□□□ -1.96
MKS1Q9NXB0 AP002001.1-203ENST00000534002 267 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 AC055872.1-201ENST00000570978 278 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 MIR4300-201ENST00000581016 96 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 AL109918.3-201ENST00000603072 338 ntBASIC2.8□□□□□ -1.96
MKS1Q9NXB0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.8□□□□□ -1.96
MKS1Q9NXB0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MKS1Q9NXB0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
MKS1Q9NXB0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.144-201ENST00000363521 113 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 SNORA71.1-201ENST00000364523 117 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 RNA5SP267-201ENST00000364893 126 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.79□□□□□ -1.96
MKS1Q9NXB0 Y_RNA.570-201ENST00000384750 101 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 TOMM22P2-201ENST00000430735 237 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 RNU7-57P-201ENST00000459540 60 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 SNORA4.4-201ENST00000515921 135 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.79□□□□□ -1.96
MKS1Q9NXB0 CYCSP26-201ENST00000534107 320 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.79□□□□□ -1.96
MKS1Q9NXB0 MIR4658-201ENST00000584344 65 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 AC025754.2-201ENST00000606491 432 ntBASIC2.79□□□□□ -1.96
MKS1Q9NXB0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 RNU6-975P-201ENST00000384296 105 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 RNU6-713P-201ENST00000384761 107 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 SRIP3-201ENST00000413200 219 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 AC123900.1-201ENST00000420390 96 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 SCARNA13-201ENST00000516672 275 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 AP003733.2-201ENST00000529409 171 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 MYL12BP1-201ENST00000569826 507 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 AC004467.1-201ENST00000615678 330 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 Z82195.2-201ENST00000612348 18351 ntBASIC2.78□□□□□ -1.96
MKS1Q9NXB0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.78□□□□□ -1.96
MKS1Q9NXB0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.77□□□□□ -1.97
MKS1Q9NXB0 RNU6-1175P-201ENST00000365200 107 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 RNU6-418P-201ENST00000384035 107 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 RNU6-196P-201ENST00000384315 107 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 RNVU1-14-201ENST00000384770 164 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 MIR1302-3-201ENST00000408128 138 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 MIR1185-2-201ENST00000408687 86 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 AL390729.2-201ENST00000416137 156 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 RPL21P38-201ENST00000418090 167 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.77□□□□□ -1.97
MKS1Q9NXB0 AC098869.1-201ENST00000481627 292 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 SRIP1-201ENST00000489235 288 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.77□□□□□ -1.97
MKS1Q9NXB0 RNU6-948P-201ENST00000516374 107 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.77□□□□□ -1.97
MKS1Q9NXB0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 MIR8062-201ENST00000621515 85 ntBASIC2.77□□□□□ -1.97
MKS1Q9NXB0 AC091932.3-201ENST00000624223 323 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms