Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 HMGN2P9-201ENST00000476875 229 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 RPL23AP63-201ENST00000498752 471 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AC026782.1-201ENST00000512952 449 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 SUMO2P18-201ENST00000518873 252 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AC011494.1-201ENST00000596454 237 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AC018462.2-201ENST00000605375 395 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 ZNF299P-201ENST00000406845 1804 ntBASIC1.52□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-873P-201ENST00000363833 107 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-595P-201ENST00000363944 107 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 MIR320B2-201ENST00000408479 138 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.594-201ENST00000410373 140 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 RNA5SP100-201ENST00000410903 110 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 RNA5SP59-201ENST00000410922 110 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AC074085.1-201ENST00000413598 418 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AC060773.1-201ENST00000421698 310 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AC099677.2-201ENST00000436385 175 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AL357134.1-201ENST00000445848 426 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AC107399.1-201ENST00000451226 265 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.670-201ENST00000516255 105 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 SNORA25.14-201ENST00000516481 132 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-1016P-201ENST00000516689 94 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 RNA5SP54-201ENST00000516951 92 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-856P-201ENST00000516959 98 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AL590705.4-201ENST00000532209 134 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 CBX3P4-201ENST00000538909 354 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AC005668.1-201ENST00000571142 476 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 7SK.7-201ENST00000603504 247 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.51□□□□□ -2.17
EXOSC3Q9NQT5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.2-201ENST00000362330 96 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-862P-201ENST00000362804 105 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-727P-201ENST00000363592 107 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.279-201ENST00000364763 95 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 SNORD87-201ENST00000364849 89 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.339-201ENST00000365325 102 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-17P-201ENST00000384245 107 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-975P-201ENST00000384296 105 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-18P-201ENST00000384527 107 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-601P-201ENST00000384540 107 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-1050P-201ENST00000410388 107 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 MTND4P17-201ENST00000470444 350 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 AP000870.1-201ENST00000472927 406 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RPL7P42-201ENST00000481005 679 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 AC010409.1-201ENST00000487382 476 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 YWHAEP4-201ENST00000505390 198 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 AC103851.1-201ENST00000506833 274 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 AC067942.3-201ENST00000512025 362 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 RNU7-175P-201ENST00000515915 61 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 AL355802.3-201ENST00000607571 545 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.5□□□□□ -2.17
EXOSC3Q9NQT5 MTND4P12-201ENST00000498999 1377 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-222P-201ENST00000362438 107 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 Y_RNA.88-201ENST00000363029 99 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 SNORD115-8-201ENST00000363856 82 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 SNORD115-38-201ENST00000365037 82 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 SNORA67.2-201ENST00000384300 149 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AL033519.2-201ENST00000403958 392 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AL356432.1-201ENST00000405809 419 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 RNA5SP504-201ENST00000410676 117 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 RPL37P10-201ENST00000412884 288 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AC009310.1-201ENST00000414414 451 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 RPL21P111-201ENST00000418453 477 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AL353997.1-201ENST00000432936 108 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 MTND3P10-201ENST00000450967 341 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 snoU13.26-201ENST00000459452 105 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AC046134.1-201ENST00000514454 666 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 RNA5SP384-201ENST00000516615 116 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 SUB1P4-201ENST00000566062 339 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AC022254.1-201ENST00000567857 235 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AC009229.3-201ENST00000608056 282 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 AC006001.4-201ENST00000622243 395 ntBASIC1.49□□□□□ -2.17
EXOSC3Q9NQT5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
EXOSC3Q9NQT5 RNU6-845P-201ENST00000362578 103 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms