Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 Z82188.1-201ENST00000436709 154 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 SEPT14P3-201ENST00000439401 183 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC073910.1-201ENST00000445047 438 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AL732372.2-207ENST00000445840 183 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC009474.2-201ENST00000451383 136 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 SEPT14P2-201ENST00000453405 183 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC004223.1-201ENST00000479840 271 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 RPL36AP21-201ENST00000490372 323 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 SEPT14P4-201ENST00000513445 186 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 FO082796.1-201ENST00000523795 183 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC016957.1-201ENST00000534895 309 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 MIR4421-201ENST00000578133 69 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AL133215.3-201ENST00000609801 448 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AL353997.5-201ENST00000618886 171 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 AC006001.4-201ENST00000622243 395 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 MIR338-201ENST00000636369 67 ntBASIC1.06□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-790P-201ENST00000384479 105 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 Y_RNA.517-201ENST00000384551 106 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-360P-201ENST00000390944 104 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-332P-201ENST00000391193 108 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RPS26P42-201ENST00000413485 326 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 MTCO1P20-201ENST00000425366 358 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AC009237.7-201ENST00000447357 229 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 MTND1P11-201ENST00000456661 876 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AC007215.1-201ENST00000464893 276 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RPL30P7-201ENST00000479312 323 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-948P-201ENST00000516374 107 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 RNU1-117P-201ENST00000517041 158 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AC019176.1-201ENST00000518519 225 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AC015712.3-201ENST00000559380 164 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AC026470.2-201ENST00000561492 181 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AP003465.2-201ENST00000602571 373 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AL162413.1-201ENST00000603198 110 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 DISC2.1-201ENST00000612827 205 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 AC005858.4-201ENST00000623191 700 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 SCARNA4-201ENST00000629045 128 ntBASIC1.05□□□□□ -2.24
EXOSC4Q9NPD3 SNORA63D-201ENST00000364359 132 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-95P-201ENST00000384697 107 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 SNORA17.3-201ENST00000391159 129 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 RNA5SP467-201ENST00000391274 118 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 RNU4-62P-201ENST00000410125 130 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-57P-201ENST00000411348 103 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 EBAG9P1-201ENST00000418955 543 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 SNRPEP10-201ENST00000420249 274 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 AL353572.1-201ENST00000442490 417 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 RNU7-57P-201ENST00000459540 60 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 AC093534.1-201ENST00000504977 132 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 RNU6-314P-201ENST00000516574 104 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 AC245505.1-201ENST00000556398 224 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 MIR3660-201ENST00000584845 100 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 AC137590.2-201ENST00000619709 240 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 AC099654.12-201ENST00000639868 649 ntBASIC1.04□□□□□ -2.24
EXOSC4Q9NPD3 RNA5SP327-201ENST00000362494 101 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 SNORA7.1-201ENST00000363750 139 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 Y_RNA.194-201ENST00000363985 102 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 SNORA67.2-201ENST00000384300 149 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 SNORA11.2-201ENST00000408318 127 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC016907.1-201ENST00000419483 435 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 CST2P1-201ENST00000425770 87 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 MTCO3P29-201ENST00000432119 779 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 HMGN2P34-201ENST00000437647 269 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 MTND1P1-201ENST00000445453 368 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC079354.2-201ENST00000453523 154 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC079140.2-201ENST00000506193 142 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC015688.6-201ENST00000577737 104 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 MIR3672-201ENST00000584290 82 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC023043.2-201ENST00000589678 1026 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 SNRPGP20-201ENST00000604477 205 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 AC097065.2-201ENST00000608159 533 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.03□□□□□ -2.24
EXOSC4Q9NPD3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
EXOSC4Q9NPD3 RNU6-451P-201ENST00000362921 107 ntBASIC1.02□□□□□ -2.25
EXOSC4Q9NPD3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.02□□□□□ -2.25
EXOSC4Q9NPD3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms