Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 AL159152.1-201ENST00000635019 2587 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP361-201ENST00000362686 118 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.187-201ENST00000363918 113 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNU6-1040P-201ENST00000383974 107 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNU6-1235P-201ENST00000384559 107 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 MIR518C-201ENST00000384822 101 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.604-201ENST00000410574 102 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 AC060773.1-201ENST00000421698 310 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 MIR2053-201ENST00000459295 91 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNU6-498P-201ENST00000459468 107 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNU7-57P-201ENST00000459540 60 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 AC234781.5-201ENST00000508429 271 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNVU1-2-201ENST00000516326 135 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNU6-948P-201ENST00000516374 107 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.675-201ENST00000516389 149 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP148-201ENST00000516527 94 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 C8orf59P2-201ENST00000603441 271 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 AC013412.1-201ENST00000610687 192 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 AC126177.8-201ENST00000618339 1015 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 MTND5P35-201ENST00000557537 1720 ntBASIC1.94□□□□□ -2.1
CHMP1AQ9HD42 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC062016.1-201ENST00000355719 319 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 RNU6-490P-201ENST00000362985 107 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 RNU5F-3P-201ENST00000363767 117 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.509-201ENST00000384506 99 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC236972.2-201ENST00000434979 310 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC114982.1-201ENST00000469402 321 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.683-201ENST00000516508 93 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 RNU2-34P-201ENST00000516534 121 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 RNU6-699P-201ENST00000517081 110 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC022868.1-201ENST00000517767 391 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC006023.1-201ENST00000603944 259 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 CYP2C61P-201ENST00000604072 290 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AC083806.3-201ENST00000614016 455 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 AP000553.5-201ENST00000641933 54 ntBASIC1.93□□□□□ -2.1
CHMP1AQ9HD42 MTND5P10-201ENST00000603719 1809 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP68-201ENST00000363885 119 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 RNY3P11-201ENST00000364153 102 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 RNU6-1145P-201ENST00000384246 107 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.463-201ENST00000384271 102 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 RNU6-318P-201ENST00000384283 103 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AL512604.1-201ENST00000404812 257 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.592-201ENST00000410274 109 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 RNU6-57P-201ENST00000411348 103 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AP001486.1-201ENST00000463339 476 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP356-201ENST00000515972 94 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AP002770.2-201ENST00000543613 532 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AC005786.1-201ENST00000588553 154 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AC080078.3-201ENST00000605407 463 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AC103810.6-201ENST00000606708 136 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AL357075.2-201ENST00000614906 189 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 MIR6766-201ENST00000622641 72 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 AC073544.1-201ENST00000600110 1595 ntBASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHMP1AQ9HD42 U3.8-201ENST00000363675 217 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 SNORA5B-201ENST00000363786 132 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 RNU6-879P-201ENST00000364328 108 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 MIR625-201ENST00000385047 85 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 SNORA69.1-201ENST00000390904 137 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AL117342.1-201ENST00000404861 406 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AC099677.2-201ENST00000436385 175 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 NDUFB4P10-201ENST00000452541 359 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 RNU6-1041P-201ENST00000516254 102 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AC091144.1-201ENST00000519573 138 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AC138305.3-201ENST00000624988 240 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 snoZ196.1-201ENST00000625269 89 ntBASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHMP1AQ9HD42 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.11
CHMP1AQ9HD42 RNU6-1115P-201ENST00000362490 106 ntBASIC1.9□□□□□ -2.11
CHMP1AQ9HD42 RNU6-1301P-201ENST00000362724 104 ntBASIC1.9□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.146-201ENST00000363549 102 ntBASIC1.9□□□□□ -2.11
CHMP1AQ9HD42 Y_RNA.315-201ENST00000365117 102 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms