Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 SNORA20.3-201ENST00000516880 132 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 RNA5SP54-201ENST00000516951 92 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 RNU6-250P-201ENST00000516958 103 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX25Q9H3E2 CBX3P8-201ENST00000532412 525 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 RRN3P3-201ENST00000549207 578 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 MIR3618-201ENST00000580330 88 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX25Q9H3E2 SNRPGP20-201ENST00000604477 205 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 AC099654.14-201ENST00000638599 341 ntBASIC1.86□□□□□ -2.11
SNX25Q9H3E2 RNU6-593P-201ENST00000364716 112 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 MIR153-2-201ENST00000385225 87 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 AL627390.1-201ENST00000396055 340 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 MIR300-201ENST00000401138 83 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 RNU6-1050P-201ENST00000410388 107 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 AL445305.1-201ENST00000432577 575 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.85□□□□□ -2.11
SNX25Q9H3E2 AC107399.1-201ENST00000451226 265 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 AC103851.1-201ENST00000506833 274 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 RNVU1-2-201ENST00000516326 135 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.85□□□□□ -2.11
SNX25Q9H3E2 MIR4524B-201ENST00000581569 115 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
SNX25Q9H3E2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SNX25Q9H3E2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.85□□□□□ -2.11
SNX25Q9H3E2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SNX25Q9H3E2 Y_RNA.405-201ENST00000383979 100 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 RNU6-418P-201ENST00000384035 107 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 Y_RNA.451-201ENST00000384200 100 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 Y_RNA.482-201ENST00000384377 111 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 Y_RNA.524-201ENST00000384564 100 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 Y_RNA.561-201ENST00000384694 100 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 SNORA48.1-201ENST00000390879 135 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 RNA5SP504-201ENST00000410676 117 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 RNU4-14P-201ENST00000410858 122 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 RPL37P10-201ENST00000412884 288 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 MTCO3P29-201ENST00000432119 779 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.84□□□□□ -2.11
SNX25Q9H3E2 HMGN1P12-201ENST00000499125 195 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 PRDX4P1-201ENST00000507189 574 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 AC067942.3-201ENST00000512025 362 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 AL590705.4-201ENST00000532209 134 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 AC005668.1-201ENST00000571142 476 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 AC104581.2-201ENST00000572227 430 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 MIR5701-3-201ENST00000578890 82 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 MIR5701-1-201ENST00000585138 82 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 AC005014.2-201ENST00000607795 599 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 MIR5701-2-201ENST00000615634 82 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 AL359757.2-201ENST00000624309 274 ntBASIC1.84□□□□□ -2.11
SNX25Q9H3E2 Y_RNA.132-201ENST00000363421 102 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 RNU6-137P-201ENST00000363680 108 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 Y_RNA.319-201ENST00000365138 92 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 Y_RNA.490-201ENST00000384413 102 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 RNU6-159P-201ENST00000391080 106 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNX25Q9H3E2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AL357134.1-201ENST00000445848 426 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 RN7SKP210-201ENST00000459176 261 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 HMGN2P9-201ENST00000476875 229 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
SNX25Q9H3E2 RNU7-175P-201ENST00000515915 61 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 RNU6-344P-201ENST00000516635 111 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 RNU6-1198P-201ENST00000516904 67 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AC005786.1-201ENST00000588553 154 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AC243960.4-201ENST00000600532 288 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AC009229.3-201ENST00000608056 282 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 AC005296.1-201ENST00000616145 209 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SNX25Q9H3E2 MTND4P12-201ENST00000498999 1377 ntBASIC1.83□□□□□ -2.12
SNX25Q9H3E2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 Y_RNA.404-201ENST00000383978 102 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 RNU6-245P-201ENST00000384020 107 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 RNU6-601P-201ENST00000384540 107 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 RNA5SP212-201ENST00000391223 107 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 MTND3P10-201ENST00000450967 341 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 AC116353.2-201ENST00000505332 712 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 RNA5SP384-201ENST00000516615 116 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 UBL5P4-201ENST00000562584 236 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 uc_338.5-201ENST00000611839 155 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
SNX25Q9H3E2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.82□□□□□ -2.12
SNX25Q9H3E2 Y_RNA.2-201ENST00000362330 96 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 275.9 ms