Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AL356095.1-201ENST00000417217 199 ntBASIC5.44□□□□□ -1.54
RNF39Q9H2S5 RPS29P33-201ENST00000456717 146 ntBASIC5.44□□□□□ -1.54
RNF39Q9H2S5 AL163195.1-201ENST00000496941 348 ntBASIC5.44□□□□□ -1.54
RNF39Q9H2S5 RNU6-122P-201ENST00000516818 107 ntBASIC5.44□□□□□ -1.54
RNF39Q9H2S5 U6.81-201ENST00000612550 106 ntBASIC5.44□□□□□ -1.54
RNF39Q9H2S5 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF39Q9H2S5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF39Q9H2S5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
RNF39Q9H2S5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF39Q9H2S5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 RNA5SP72-201ENST00000364442 117 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 SNORA70.10-201ENST00000384515 134 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 AP000873.1-201ENST00000463987 400 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 RNA5SP392-201ENST00000516905 112 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 AC024995.1-201ENST00000523014 93 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 MIR4737-201ENST00000583979 81 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 uc_338.18-201ENST00000615451 175 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 MIR7703-201ENST00000620784 77 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF39Q9H2S5 AC104260.2-201ENST00000623551 3497 ntBASIC5.43□□□□□ -1.54
RNF39Q9H2S5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 RNU6-35P-201ENST00000384530 107 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 MIR515-2-201ENST00000384883 83 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 MIR515-1-201ENST00000384884 83 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 SNORA48.4-201ENST00000391089 134 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AL157831.1-201ENST00000426134 473 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 FTLP19-201ENST00000433300 394 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 RPL23AP83-201ENST00000434984 473 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 RPS29P9-201ENST00000440360 171 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AL357552.1-201ENST00000445254 415 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 TRBV12-1-201ENST00000479785 344 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AC097510.1-201ENST00000510945 133 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 RNU6-982P-201ENST00000516216 102 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 EIF4BP1-201ENST00000554881 351 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AC007179.3-201ENST00000604976 235 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 CR392039.5-201ENST00000623201 510 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF39Q9H2S5 AP002512.4-202ENST00000641599 4530 ntBASIC5.42□□□□□ -1.54
RNF39Q9H2S5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 MIR516A2-201ENST00000384888 90 ntBASIC5.41□□□□□ -1.54
RNF39Q9H2S5 MIR516A1-201ENST00000385033 90 ntBASIC5.41□□□□□ -1.54
RNF39Q9H2S5 RN7SL297P-201ENST00000483161 293 ntBASIC5.41□□□□□ -1.54
RNF39Q9H2S5 AL162274.2-201ENST00000614406 332 ntBASIC5.41□□□□□ -1.54
RNF39Q9H2S5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF39Q9H2S5 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF39Q9H2S5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF39Q9H2S5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF39Q9H2S5 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RNF39Q9H2S5 TRIAP1P1-201ENST00000427062 225 ntBASIC5.4□□□□□ -1.54
RNF39Q9H2S5 BX276092.1-201ENST00000427368 251 ntBASIC5.4□□□□□ -1.54
RNF39Q9H2S5 COX6CP13-201ENST00000428703 226 ntBASIC5.4□□□□□ -1.54
RNF39Q9H2S5 RPL23AP6-201ENST00000446637 472 ntBASIC5.4□□□□□ -1.54
RNF39Q9H2S5 RPS29P22-201ENST00000472363 168 ntBASIC5.4□□□□□ -1.54
RNF39Q9H2S5 MIR8055-201ENST00000610739 97 ntBASIC5.4□□□□□ -1.54
RNF39Q9H2S5 AC112200.1-201ENST00000625015 234 ntBASIC5.4□□□□□ -1.54
RNF39Q9H2S5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF39Q9H2S5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF39Q9H2S5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF39Q9H2S5 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF39Q9H2S5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF39Q9H2S5 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RNF39Q9H2S5 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 AC133552.1-201ENST00000569988 4007 ntBASIC5.39□□□□□ -1.55
RNF39Q9H2S5 SNORA7.2-201ENST00000364446 145 ntBASIC5.39□□□□□ -1.55
RNF39Q9H2S5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF39Q9H2S5 ATP5A1P2-201ENST00000412323 255 ntBASIC5.39□□□□□ -1.55
RNF39Q9H2S5 AC008897.1-201ENST00000494006 347 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms