Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.31□□□□□ -2.04
USP44Q9H0E7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 MIR32-201ENST00000384965 70 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 SNORD23.1-201ENST00000408212 104 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 AC123900.1-201ENST00000420390 96 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 RNU2-44P-201ENST00000516795 194 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 SNORA31.25-201ENST00000517242 134 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 AC121758.2-201ENST00000553271 193 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 AL050343.2-201ENST00000607338 280 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 AC133104.2-201ENST00000615272 193 ntBASIC2.3□□□□□ -2.04
USP44Q9H0E7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.3□□□□□ -2.04
USP44Q9H0E7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC008555.8-201ENST00000623602 2168 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC006026.1-201ENST00000444025 1803 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 Y_RNA.187-201ENST00000363918 113 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 Y_RNA.419-201ENST00000384041 102 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 Y_RNA.535-201ENST00000384612 99 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 MIR583-201ENST00000384846 75 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 SNORA12.2-201ENST00000391040 156 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 RNU6-700P-201ENST00000391043 107 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 RNA5SP465-201ENST00000391195 109 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 RPL23AP50-201ENST00000434149 455 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC009237.7-201ENST00000447357 229 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC007395.1-201ENST00000451333 677 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 RNU1-131P-201ENST00000458943 161 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 RNU7-14P-201ENST00000459331 62 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC022493.2-201ENST00000506122 481 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC093303.1-201ENST00000514549 295 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 AL133255.1-201ENST00000606374 441 ntBASIC2.29□□□□□ -2.04
USP44Q9H0E7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.29□□□□□ -2.04
USP44Q9H0E7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
USP44Q9H0E7 MTND4P29-201ENST00000503122 1372 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 SNORA51.11-201ENST00000384442 131 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU6-160P-201ENST00000384591 107 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU6-541P-201ENST00000384709 110 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 MIR549A-201ENST00000385268 96 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 Y_RNA.579-201ENST00000390939 94 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 MTCYBP10-201ENST00000424905 650 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 AL591806.2-201ENST00000433122 173 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.28□□□□□ -2.04
USP44Q9H0E7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.28□□□□□ -2.04
USP44Q9H0E7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.28□□□□□ -2.04
USP44Q9H0E7 AC074290.1-201ENST00000448883 135 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 AC016925.1-201ENST00000458303 298 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 AC114982.1-201ENST00000469402 321 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RPL17P19-201ENST00000489069 552 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU6-470P-201ENST00000515954 104 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU2-34P-201ENST00000516534 121 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU6-344P-201ENST00000516635 111 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU7-193P-201ENST00000516723 65 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU6-58P-201ENST00000517143 103 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 AC016727.2-201ENST00000603988 621 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.28□□□□□ -2.04
USP44Q9H0E7 RNU1-62P-201ENST00000362599 164 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 SNORA18.2-201ENST00000383865 132 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 MIR559-201ENST00000385188 96 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 SUMO2P12-201ENST00000405924 140 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.27□□□□□ -2.05
USP44Q9H0E7 TOMM22P6-201ENST00000465035 409 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 MIR449C-201ENST00000516047 92 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.27□□□□□ -2.05
USP44Q9H0E7 MIR5006-201ENST00000583027 110 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 MIR3935-201ENST00000583472 104 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 AL355802.3-201ENST00000607571 545 ntBASIC2.27□□□□□ -2.05
USP44Q9H0E7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
USP44Q9H0E7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
USP44Q9H0E7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USP44Q9H0E7 MTND5P10-201ENST00000603719 1809 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
USP44Q9H0E7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USP44Q9H0E7 AL596028.1-201ENST00000326971 197 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 RNU6-874P-201ENST00000362390 105 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 Y_RNA.132-201ENST00000363421 102 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 RNU6-743P-201ENST00000364151 106 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 SNORA16.1-201ENST00000364597 132 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 RNU6-99P-201ENST00000364721 107 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 Y_RNA.315-201ENST00000365117 102 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 RNU6-1040P-201ENST00000383974 107 ntBASIC2.26□□□□□ -2.05
USP44Q9H0E7 SNORA6-201ENST00000384033 151 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms