Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 SNORD111.1-201ENST00000516421 86 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC004584.2-201ENST00000570407 410 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 MIR3146-201ENST00000580367 79 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 SNORA25.18-201ENST00000607153 114 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 AC026585.1-201ENST00000619582 524 ntBASIC-0.55□□□□□ -2.5
SCAPERQ9BY12 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 SNORD113.3-201ENST00000364630 78 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 RNU6-384P-201ENST00000364900 104 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 MIR1253-201ENST00000408273 105 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 MIR1185-1-201ENST00000408598 86 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 AC016909.1-201ENST00000415916 166 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 AL354692.1-201ENST00000423044 315 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 AC244670.1-201ENST00000436879 112 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 SNORD4A-201ENST00000459174 72 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 PART1_2.1-201ENST00000612397 250 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 uc_338.16-201ENST00000621804 95 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 uc_338.36-201ENST00000622331 158 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 U6.108-201ENST00000637764 58 ntBASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.56□□□□□ -2.5
SCAPERQ9BY12 MTND5P32-201ENST00000560711 1802 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 AP000568.1-201ENST00000282964 442 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 SNORA75.6-201ENST00000391318 127 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 AL663109.1-201ENST00000411498 844 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 AC092809.3-201ENST00000415453 231 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 AC112206.4-201ENST00000515142 405 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 DEFB131D-201ENST00000526803 184 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 AL391840.1-201ENST00000571144 367 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 AP002360.4-201ENST00000606980 481 ntBASIC-0.57□□□□□ -2.5
SCAPERQ9BY12 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 RNU6-378P-201ENST00000384324 107 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 MIR1283-1-201ENST00000408494 87 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 CDK8P2-201ENST00000415020 547 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 RNA5SP268-201ENST00000516828 124 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 RNU2-12P-201ENST00000517216 168 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 AC009712.1-201ENST00000564938 316 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 AC090517.1-201ENST00000569307 266 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 MIR4753-201ENST00000585119 83 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 AL359075.3-201ENST00000613288 217 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 RN7SL660P-201ENST00000614852 299 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 MIR548AZ-201ENST00000616567 95 ntBASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.58□□□□□ -2.5
SCAPERQ9BY12 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 SNORA1.1-201ENST00000364671 133 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 AC106883.1-201ENST00000418805 562 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 DEFB130D-201ENST00000426866 237 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 AC078809.1-201ENST00000427601 140 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 HSFY7P-201ENST00000432672 318 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 HSFY8P-201ENST00000437934 318 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 snoU13.21-201ENST00000459368 105 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 AC105185.1-201ENST00000518705 535 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 IGKV1-22-201ENST00000524313 326 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 OR8K2P-201ENST00000524645 927 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 SNORA28-201ENST00000606769 126 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 AC104458.1-201ENST00000608243 463 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 AC122133.1-201ENST00000613964 233 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 FRG1KP-201ENST00000623592 341 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 AL450472.1-202ENST00000637286 180 ntBASIC-0.59□□□□□ -2.5
SCAPERQ9BY12 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 RNU2-59P-201ENST00000410482 191 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 MED13P1-201ENST00000428342 171 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 AC087685.1-201ENST00000587507 141 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 AC005176.2-201ENST00000596933 147 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 AC025449.1-201ENST00000603896 529 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 RBM11P1-201ENST00000604951 799 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 AL356596.1-201ENST00000624230 379 ntBASIC-0.6□□□□□ -2.51
SCAPERQ9BY12 snoZ40.1-201ENST00000364540 72 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 SNORD114-12-201ENST00000365400 75 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 RNU6-190P-201ENST00000384154 102 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 AC010975.2-201ENST00000427781 588 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 MTND4LP7-201ENST00000431728 294 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 SNORD57-201ENST00000448188 72 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 AC093850.1-201ENST00000454121 251 ntBASIC-0.61□□□□□ -2.51
SCAPERQ9BY12 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms