Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 AC006445.2-201ENST00000510061 472 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.709-201ENST00000516952 92 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 SNORD19.2-201ENST00000516978 73 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.712-201ENST00000517011 92 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 AC090142.3-201ENST00000519012 385 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 AC093331.1-201ENST00000521474 169 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 MIR4679-2-201ENST00000578358 77 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.757-201ENST00000578934 114 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 HMGN2P15-201ENST00000585707 270 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 AC025754.2-201ENST00000606491 432 ntBASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
SSBP3Q9BWW4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 RNU4-15P-201ENST00000362613 141 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 MIR183-201ENST00000384958 110 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 RNA5SP504-201ENST00000410676 117 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 snoU13.14-201ENST00000459372 104 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 RNU5E-3P-201ENST00000515913 68 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 RNU2-27P-201ENST00000516185 142 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 MTND5P34-201ENST00000568888 325 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 RNVU1-4-201ENST00000612985 164 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 MIR8058-201ENST00000615737 89 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 U4.6-201ENST00000621618 127 ntBASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SSBP3Q9BWW4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.251-201ENST00000364551 99 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 AP002088.1-201ENST00000382740 395 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 SNORA22-201ENST00000383907 134 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.525-201ENST00000384570 113 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 MIR184-201ENST00000384962 84 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 RNU4-43P-201ENST00000410628 137 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 DBIP2-201ENST00000419076 262 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 AC016925.1-201ENST00000458303 298 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 AC145146.1-201ENST00000496370 254 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 RN7SKP289-201ENST00000517244 295 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 MIR3609-201ENST00000582661 80 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 AC091152.3-201ENST00000604227 325 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 XIST_intron.1-201ENST00000619444 68 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 U6.105-201ENST00000637379 88 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 OTUD4P1-201ENST00000237841 3067 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 CENPCP1-201ENST00000533085 2578 ntBASIC2.92□□□□□ -1.94
SSBP3Q9BWW4 AL513302.2-201ENST00000562313 1842 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RNU6-1255P-201ENST00000363434 112 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 U8.7-201ENST00000364940 136 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 MIR34B-201ENST00000385076 84 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 Y_RNA.584-201ENST00000391090 114 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RNU6-383P-201ENST00000410864 94 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RPL23AP82-202ENST00000427528 469 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RBMY2UP-201ENST00000453474 324 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RPS3P1-201ENST00000456781 192 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RNA5SP310-201ENST00000459084 116 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RPL21P10-201ENST00000463521 490 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 AC091153.1-201ENST00000466297 402 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RN7SL594P-201ENST00000470590 287 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 AC025518.1-201ENST00000479856 347 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 AC117454.1-201ENST00000491120 168 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 HSPE1P18-201ENST00000517602 280 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 AC023043.3-201ENST00000593113 385 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 MIR548AY-201ENST00000617669 107 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 MIR7153-201ENST00000637758 57 ntBASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SSBP3Q9BWW4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSBP3Q9BWW4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSBP3Q9BWW4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.9□□□□□ -1.94
SSBP3Q9BWW4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SSBP3Q9BWW4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms