Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 Y_RNA.290-201ENST00000364879 114 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 Y_RNA.298-201ENST00000364960 107 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 RNU1-106P-201ENST00000384382 164 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 AC012671.1-201ENST00000451912 203 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 AP000873.1-201ENST00000463987 400 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 HMGN1P7-201ENST00000491722 313 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 RNU7-70P-201ENST00000516941 66 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 AC007225.2-201ENST00000562529 256 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 AC007229.1-201ENST00000590455 412 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 RN7SL722P-201ENST00000617780 284 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 RN7SL565P-201ENST00000618246 284 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.27□□□□□ -1.89
SSBP4Q9BWG4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 SNORA31-201ENST00000362607 130 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 U8.4-201ENST00000363626 134 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RNA5SP167-201ENST00000365461 116 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 MIR520G-201ENST00000385064 90 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RNU6-816P-201ENST00000390914 107 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RNU6-1268P-201ENST00000391214 107 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RNU6-1239P-201ENST00000391310 107 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RPL21P65-201ENST00000406094 466 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 AC016909.1-201ENST00000415916 166 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 SNRPGP10-201ENST00000432323 225 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RNU7-164P-201ENST00000459221 62 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RNU7-23P-201ENST00000459465 62 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RN7SL330P-201ENST00000469709 307 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 AP001880.2-201ENST00000538233 448 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 uc_338.14-201ENST00000613162 166 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 Z82217.1-201ENST00000625157 8149 ntBASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
SSBP4Q9BWG4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 Y_RNA.10-201ENST00000362371 110 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 RNA5SP305-201ENST00000362665 119 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 SNORA2.2-201ENST00000365473 135 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 MIR548A2-201ENST00000384956 97 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 Y_RNA.601-201ENST00000410500 113 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC093162.1-201ENST00000419682 124 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC016831.4-201ENST00000438302 307 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC073850.1-201ENST00000449243 255 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 SNRPGP3-201ENST00000469405 227 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC022254.1-201ENST00000567857 235 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC008507.4-201ENST00000585464 127 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC022217.4-201ENST00000604389 163 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 MIR8058-201ENST00000615737 89 ntBASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.25□□□□□ -1.89
SSBP4Q9BWG4 MAPK10-373ENST00000641983 6772 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 AC021146.4-201ENST00000309229 279 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 RNU6-349P-201ENST00000362402 107 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 RNU6-944P-201ENST00000364023 107 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 SNORA4.2-201ENST00000365313 147 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 RNU6-438P-201ENST00000365561 103 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 RNU6-198P-201ENST00000384258 104 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 MIR765-201ENST00000390226 114 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 AC097463.2-201ENST00000421074 142 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 AL133162.1-201ENST00000463228 453 ntBASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.24□□□□□ -1.89
SSBP4Q9BWG4 AC004486.1-201ENST00000546846 233 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms