Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 Y_RNA.599-201ENST00000410489 109 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 Y_RNA.619-201ENST00000410951 90 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 NCOR1P3-201ENST00000420479 303 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 CYCSP49-201ENST00000420810 319 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 USP9YP30-201ENST00000430729 455 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 RN7SKP210-201ENST00000459176 261 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 RNU6-498P-201ENST00000459468 107 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 HMGN2P9-201ENST00000476875 229 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 RNU6-237P-201ENST00000515985 71 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 Y_RNA.682-201ENST00000516457 100 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 AC027288.2-201ENST00000553028 243 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.05□□□□□ -2.08
SDF4Q9BRK5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
SDF4Q9BRK5 AC122108.2-201ENST00000611946 526 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 MIR6128-201ENST00000615528 109 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 AC084768.2-201ENST00000622736 221 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 AC008873.1-201ENST00000625051 138 ntBASIC2.05□□□□□ -2.08
SDF4Q9BRK5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SDF4Q9BRK5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
SDF4Q9BRK5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
SDF4Q9BRK5 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.04□□□□□ -2.08
SDF4Q9BRK5 ZNF299P-201ENST00000406845 1804 ntBASIC2.04□□□□□ -2.08
SDF4Q9BRK5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.04□□□□□ -2.08
SDF4Q9BRK5 PPP1R2P5-201ENST00000457256 603 ntBASIC2.04□□□□□ -2.08
SDF4Q9BRK5 RPL30P10-201ENST00000488148 337 ntBASIC2.04□□□□□ -2.08
SDF4Q9BRK5 AC082651.2-201ENST00000496833 166 ntBASIC2.04□□□□□ -2.08
SDF4Q9BRK5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.04□□□□□ -2.08
SDF4Q9BRK5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.04□□□□□ -2.08
SDF4Q9BRK5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.04□□□□□ -2.08
SDF4Q9BRK5 AC103810.8-201ENST00000607347 118 ntBASIC2.04□□□□□ -2.08
SDF4Q9BRK5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
SDF4Q9BRK5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SDF4Q9BRK5 RNU6-595P-201ENST00000363944 107 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 RNU6-593P-201ENST00000364716 112 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 RNU6-842P-201ENST00000384269 107 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 Y_RNA.533-201ENST00000384596 114 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 MIR548K-201ENST00000408406 116 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC099677.2-201ENST00000436385 175 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC074290.1-201ENST00000448883 135 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC010409.1-201ENST00000487382 476 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC018710.1-201ENST00000506509 158 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.03□□□□□ -2.08
SDF4Q9BRK5 GNAI2P1-201ENST00000541815 315 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.03□□□□□ -2.08
SDF4Q9BRK5 MIR5094-201ENST00000578766 85 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 MIR3618-201ENST00000580330 88 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC011712.1-201ENST00000588959 234 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AL353149.1-201ENST00000610667 244 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AC084782.3-201ENST00000612282 578 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 AL353997.5-201ENST00000618886 171 ntBASIC2.03□□□□□ -2.08
SDF4Q9BRK5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SDF4Q9BRK5 RNU1-62P-201ENST00000362599 164 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 RNU6-112P-201ENST00000363599 104 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 RNU6-482P-201ENST00000391068 107 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AC060773.1-201ENST00000421698 310 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.02□□□□□ -2.09
SDF4Q9BRK5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.02□□□□□ -2.09
SDF4Q9BRK5 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AC046134.1-201ENST00000514454 666 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 RNU7-175P-201ENST00000515915 61 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AL590705.4-201ENST00000532209 134 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AC104581.2-201ENST00000572227 430 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AL133216.2-202ENST00000634512 349 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 AC245060.5-201ENST00000610778 3293 ntBASIC2.02□□□□□ -2.09
SDF4Q9BRK5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SDF4Q9BRK5 RNU6-862P-201ENST00000362804 105 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 RNU6-1059P-201ENST00000363752 98 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 RNA5SP99-201ENST00000364020 114 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 RNU6-159P-201ENST00000391080 106 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AL117342.1-201ENST00000404861 406 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AC074085.1-201ENST00000413598 418 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 HMGB1P18-201ENST00000438801 619 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AC112492.4-201ENST00000456549 352 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AC011406.1-201ENST00000512440 370 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 SNORA25.15-201ENST00000516487 89 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AC134698.4-201ENST00000523451 826 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AC018462.2-201ENST00000605375 395 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 SNORD11B-201ENST00000607707 90 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 AL078596.1-201ENST00000624856 447 ntBASIC2.01□□□□□ -2.09
SDF4Q9BRK5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.01□□□□□ -2.09
SDF4Q9BRK5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
SDF4Q9BRK5 RNU6-280P-201ENST00000364145 104 ntBASIC2□□□□□ -2.09
SDF4Q9BRK5 SNORD48-201ENST00000364953 64 ntBASIC2□□□□□ -2.09
SDF4Q9BRK5 Y_RNA.339-201ENST00000365325 102 ntBASIC2□□□□□ -2.09
SDF4Q9BRK5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SDF4Q9BRK5 RNU6-541P-201ENST00000384709 110 ntBASIC2□□□□□ -2.09
SDF4Q9BRK5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
SDF4Q9BRK5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2□□□□□ -2.09
SDF4Q9BRK5 AC016717.1-201ENST00000448918 286 ntBASIC2□□□□□ -2.09
SDF4Q9BRK5 HMGB3P17-201ENST00000504195 649 ntBASIC2□□□□□ -2.09
SDF4Q9BRK5 SNORA25.14-201ENST00000516481 132 ntBASIC2□□□□□ -2.09
SDF4Q9BRK5 RNA5SP384-201ENST00000516615 116 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms