Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MIR1244-2-201ENST00000636449 85 ntBASIC1.61□□□□□ -2.15
EBF4Q9BQW3 MIR1244-4-202ENST00000636813 85 ntBASIC1.61□□□□□ -2.15
EBF4Q9BQW3 MTND5P9-201ENST00000503854 1755 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 Y_RNA.197-201ENST00000364004 102 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 RNU6-1040P-201ENST00000383974 107 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 SNORA29-201ENST00000384183 140 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 RNU6-784P-201ENST00000384330 106 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 MIR1283-2-201ENST00000408621 87 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 RNA5SP450-201ENST00000411206 102 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AL590556.1-201ENST00000423231 483 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 DAP3P1-201ENST00000441522 278 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AL137792.2-201ENST00000443484 235 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.6□□□□□ -2.15
EBF4Q9BQW3 U8.22-201ENST00000459141 133 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 U8.21-201ENST00000459536 136 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AC093259.1-201ENST00000509755 300 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
EBF4Q9BQW3 RPL23AP94-201ENST00000512518 302 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.6□□□□□ -2.15
EBF4Q9BQW3 RNU6-1137P-201ENST00000517073 99 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AP000889.1-201ENST00000530968 660 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AP003072.1-201ENST00000531740 145 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 DEFB122-202ENST00000569013 197 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AC005034.5-201ENST00000604219 466 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AC090971.5-201ENST00000621102 293 ntBASIC1.6□□□□□ -2.15
EBF4Q9BQW3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
EBF4Q9BQW3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
EBF4Q9BQW3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
EBF4Q9BQW3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 MIR449A-201ENST00000362113 91 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 RNY1P16-201ENST00000363063 111 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 RNU6-596P-201ENST00000365395 98 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 SNORA22B-201ENST00000383876 138 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 Y_RNA.395-201ENST00000383945 109 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 BX510359.4-201ENST00000423750 193 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AC096920.1-201ENST00000423991 241 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 RPL23AP50-201ENST00000434149 455 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 RPL23AP75-201ENST00000491601 451 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AC104564.1-201ENST00000493028 407 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 ACA59.1-201ENST00000515966 143 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 SCARNA15.1-201ENST00000516384 125 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 HSPE1P18-201ENST00000517602 280 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AC026271.5-201ENST00000577873 130 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 MIR5701-3-201ENST00000578890 82 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 MIR3923-201ENST00000579521 83 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 MIR5701-1-201ENST00000585138 82 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 AC022432.1-201ENST00000595739 310 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.59□□□□□ -2.15
EBF4Q9BQW3 MIR5701-2-201ENST00000615634 82 ntBASIC1.59□□□□□ -2.15
EBF4Q9BQW3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
EBF4Q9BQW3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.59□□□□□ -2.16
EBF4Q9BQW3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.59□□□□□ -2.16
EBF4Q9BQW3 MTND5P10-201ENST00000603719 1809 ntBASIC1.59□□□□□ -2.16
EBF4Q9BQW3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AC008555.8-201ENST00000623602 2168 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 RNA5SP276-201ENST00000362580 94 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 RNU6-595P-201ENST00000363944 107 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.326-201ENST00000365176 113 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.405-201ENST00000383979 100 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 RNU6-1227P-201ENST00000383981 107 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 RNU6-26P-201ENST00000383985 107 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.451-201ENST00000384200 100 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 RNU6-708P-201ENST00000384217 107 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 SNORD14D-201ENST00000384390 87 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.524-201ENST00000384564 100 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 Y_RNA.561-201ENST00000384694 100 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 RN7SKP101-201ENST00000411376 320 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AL358453.1-201ENST00000422522 250 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AC018865.2-201ENST00000423631 129 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 TOMM22P6-201ENST00000465035 409 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 ATP5EP1-201ENST00000510257 156 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AC021231.3-201ENST00000558497 370 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 MIR4529-201ENST00000578110 78 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AC087588.2-201ENST00000617667 426 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AC091925.1-201ENST00000623204 462 ntBASIC1.58□□□□□ -2.16
EBF4Q9BQW3 AC064859.1-201ENST00000624741 174 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms