Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.89□□□□□ -2.11
LITAFQ99732 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.89□□□□□ -2.11
LITAFQ99732 RPL21P9-201ENST00000556149 474 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC1.89□□□□□ -2.11
LITAFQ99732 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.89□□□□□ -2.11
LITAFQ99732 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC1.89□□□□□ -2.11
LITAFQ99732 MIR3145-201ENST00000580727 82 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.89□□□□□ -2.11
LITAFQ99732 AL442067.1-201ENST00000613261 223 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 MIR6730-201ENST00000622213 67 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 MIR1248-201ENST00000629190 106 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 MIR3651-201ENST00000630427 90 ntBASIC1.89□□□□□ -2.11
LITAFQ99732 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LITAFQ99732 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
LITAFQ99732 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.89□□□□□ -2.11
LITAFQ99732 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.89□□□□□ -2.11
LITAFQ99732 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
LITAFQ99732 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
LITAFQ99732 UBE2WP1-201ENST00000362030 340 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 MIR22-201ENST00000362190 85 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 RNU1-23P-201ENST00000363361 144 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 Y_RNA.275-201ENST00000364726 110 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 SNORD31B-201ENST00000364977 69 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 Y_RNA.329-201ENST00000365209 107 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 RNA5SP240-201ENST00000365355 128 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 SNORA9.2-201ENST00000365361 133 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 RNU6-546P-201ENST00000383991 107 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 SNORA5A-201ENST00000384111 134 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
LITAFQ99732 MIR1185-2-201ENST00000408687 86 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 U3.40-201ENST00000408706 208 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 HMGN2P35-201ENST00000412164 270 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 AC016769.2-201ENST00000414815 475 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 Z75741.1-201ENST00000446793 314 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.88□□□□□ -2.11
LITAFQ99732 SRIP1-201ENST00000489235 288 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.88□□□□□ -2.11
LITAFQ99732 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.88□□□□□ -2.11
LITAFQ99732 RNU6-436P-201ENST00000516171 114 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 RNU1-95P-201ENST00000516357 160 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 RNU1-128P-201ENST00000516704 160 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 SNORA48.11-201ENST00000517015 89 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.88□□□□□ -2.11
LITAFQ99732 AC022616.8-201ENST00000533569 253 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.88□□□□□ -2.11
LITAFQ99732 DEFB117-201ENST00000602356 141 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 AL356280.1-201ENST00000603614 379 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.88□□□□□ -2.11
LITAFQ99732 ZYXP1-201ENST00000617638 118 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 MIR7641-1-201ENST00000627518 61 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.88□□□□□ -2.11
LITAFQ99732 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.88□□□□□ -2.11
LITAFQ99732 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
LITAFQ99732 AC138915.1-201ENST00000565427 1685 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.87□□□□□ -2.11
LITAFQ99732 MIR26A1-201ENST00000362205 77 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 Y_RNA.76-201ENST00000362931 109 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 VTRNA1-1-201ENST00000363120 99 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 RNU4-80P-201ENST00000363200 141 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 RNU6-324P-201ENST00000363957 106 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 SNORD115-30-201ENST00000364117 82 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 Y_RNA.243-201ENST00000364481 109 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 RNU6-200P-201ENST00000364743 107 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 SNORA54-201ENST00000384281 123 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.87□□□□□ -2.11
LITAFQ99732 EEF1B2P7-201ENST00000451177 676 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 RNU7-57P-201ENST00000459540 60 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 AC109925.1-201ENST00000478069 331 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 AC091826.1-201ENST00000514065 313 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 RNU6-138P-201ENST00000515952 107 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 RNU6-191P-201ENST00000516295 94 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 MIR2116-201ENST00000517221 80 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.87□□□□□ -2.11
LITAFQ99732 AC022080.3-201ENST00000544433 482 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 AC130289.1-201ENST00000577321 73 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 MIR3117-201ENST00000584034 78 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 MIR3616-201ENST00000584070 92 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 MIR4753-201ENST00000585119 83 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 AL512605.2-201ENST00000592972 256 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 AL162424.1-201ENST00000602325 221 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LITAFQ99732 U6.115-201ENST00000636045 103 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LITAFQ99732 ZNF271P-202ENST00000465539 1970 ntBASIC1.87□□□□□ -2.11
LITAFQ99732 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.86□□□□□ -2.11
LITAFQ99732 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LITAFQ99732 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LITAFQ99732 Y_RNA.117-201ENST00000363294 101 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 RNU6-975P-201ENST00000384296 105 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LITAFQ99732 AL031003.1-201ENST00000404229 172 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 RNA5SP181-201ENST00000410246 98 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 RNU2-63P-201ENST00000410792 194 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 RNU6-651P-201ENST00000411040 105 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 AL139156.1-201ENST00000412785 841 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.86□□□□□ -2.11
LITAFQ99732 AC003685.2-201ENST00000422795 395 ntBASIC1.86□□□□□ -2.11
LITAFQ99732 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.86□□□□□ -2.11
LITAFQ99732 CR769767.1-201ENST00000436337 346 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms