Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 EPS15P1-201ENST00000448836 336 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 AC016717.1-201ENST00000448918 286 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 MTCO2P6-201ENST00000463134 685 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 AC010486.2-201ENST00000505572 483 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.53□□□□□ -2.33
SCAF11Q99590 SNORA31.4-201ENST00000516049 129 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 SNORA25.17-201ENST00000517184 124 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 AP003461.1-201ENST00000528866 78 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.53□□□□□ -2.33
SCAF11Q99590 TPRKBP2-201ENST00000565969 475 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 RSL24D1P11-201ENST00000591045 491 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 AL929325.1-201ENST00000603096 117 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 TUSC7.1-201ENST00000610969 165 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.53□□□□□ -2.33
SCAF11Q99590 AL078595.3-201ENST00000623815 1166 ntBASIC0.53□□□□□ -2.33
SCAF11Q99590 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.53□□□□□ -2.33
SCAF11Q99590 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.53□□□□□ -2.33
SCAF11Q99590 SNORD114-24-201ENST00000365029 72 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 RNU6-1029P-201ENST00000384109 107 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 RNU6-74P-201ENST00000384235 107 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 RNU6-910P-201ENST00000390844 107 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 RNA5SP109-201ENST00000391010 116 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 RNA5SP467-201ENST00000391274 118 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 AC114482.1-201ENST00000418010 247 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 AC010154.1-201ENST00000425857 269 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.52□□□□□ -2.33
SCAF11Q99590 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.52□□□□□ -2.33
SCAF11Q99590 MIR5190-201ENST00000581537 80 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 AC104458.1-201ENST00000608243 463 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 AP000240.1-201ENST00000609910 452 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 AC021506.2-201ENST00000612354 169 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 uc_338.11-201ENST00000619132 160 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 AC009509.4-201ENST00000619202 509 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 uc_338.22-201ENST00000622722 187 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 SNORA43.4-201ENST00000629559 138 ntBASIC0.52□□□□□ -2.33
SCAF11Q99590 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.51□□□□□ -2.33
SCAF11Q99590 SNORA33-201ENST00000363664 130 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNY4P34-201ENST00000364779 95 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNU6-975P-201ENST00000384296 105 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNA5SP323-201ENST00000391094 133 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNU4-46P-201ENST00000410818 138 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNU6-1054P-201ENST00000411293 104 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RAB28P5-201ENST00000427490 651 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 GPR143P-201ENST00000434155 205 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 AC002429.1-201ENST00000437672 148 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.51□□□□□ -2.33
SCAF11Q99590 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.51□□□□□ -2.33
SCAF11Q99590 SNORA31.2-201ENST00000516019 134 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNU2-69P-201ENST00000516061 100 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNU6-311P-201ENST00000516224 102 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 RNU6-758P-201ENST00000516292 89 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.51□□□□□ -2.33
SCAF11Q99590 AC024995.1-201ENST00000523014 93 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 MTND1P8-201ENST00000571424 950 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 AL513534.2-201ENST00000603836 250 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.51□□□□□ -2.33
SCAF11Q99590 AC002044.1-201ENST00000606707 158 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 AL359697.1-201ENST00000624879 587 ntBASIC0.51□□□□□ -2.33
SCAF11Q99590 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.51□□□□□ -2.33
SCAF11Q99590 Y_RNA.287-201ENST00000364853 94 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 RNU6-1031P-201ENST00000384773 107 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 MIR608-201ENST00000384820 100 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 MIR10B-201ENST00000385011 110 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 MIR1253-201ENST00000408273 105 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 HMGN2P34-201ENST00000437647 269 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 ZNF114P1-201ENST00000453500 292 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 AC048334.1-201ENST00000477975 159 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.5□□□□□ -2.33
SCAF11Q99590 MIR3682-201ENST00000581338 84 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 MIR5006-201ENST00000583027 110 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 TCL6_2.1-201ENST00000615162 119 ntBASIC0.5□□□□□ -2.33
SCAF11Q99590 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.5□□□□□ -2.33
SCAF11Q99590 RNU4-79P-201ENST00000362764 141 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 RNU6-1097P-201ENST00000363586 107 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 MIR1-2-201ENST00000384961 85 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 RNU2-64P-201ENST00000411315 191 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 AC063976.4-201ENST00000421971 163 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 AC011233.1-201ENST00000422812 283 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 AC004386.2-201ENST00000441858 148 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 SCARNA18-201ENST00000459004 134 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.49□□□□□ -2.33
SCAF11Q99590 TRBVA-201ENST00000498804 316 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 RNA5SP168-201ENST00000516642 112 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 RNU1-142P-201ENST00000516682 145 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 DEFB131C-201ENST00000528817 165 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.49□□□□□ -2.33
SCAF11Q99590 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.49□□□□□ -2.33
SCAF11Q99590 AC068790.6-201ENST00000602558 258 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 Z84480.1-201ENST00000605131 311 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.49□□□□□ -2.33
SCAF11Q99590 AC005562.2-201ENST00000618264 111 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
SCAF11Q99590 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SCAF11Q99590 MIR409-201ENST00000362237 79 ntBASIC0.48□□□□□ -2.33
SCAF11Q99590 Y_RNA.124-201ENST00000363339 93 ntBASIC0.48□□□□□ -2.33
SCAF11Q99590 Y_RNA.142-201ENST00000363491 102 ntBASIC0.48□□□□□ -2.33
SCAF11Q99590 SNORA16.2-201ENST00000390991 127 ntBASIC0.48□□□□□ -2.33
SCAF11Q99590 RPS3AP3-201ENST00000411933 242 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms