Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC133104.2-201ENST00000615272 193 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN2AQ99250 ZNF299P-201ENST00000406845 1804 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCN2AQ99250 AC080100.1-201ENST00000624239 5356 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
SCN2AQ99250 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCN2AQ99250 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SCN2AQ99250 Y_RNA.355-201ENST00000365462 98 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 HMGN2P39-201ENST00000398005 273 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN2AQ99250 AC092473.1-201ENST00000441098 221 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 AC009237.7-201ENST00000447357 229 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN2AQ99250 HMGN2P9-201ENST00000476875 229 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.39□□□□□ -2.19
SCN2AQ99250 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
SCN2AQ99250 HSBP1P1-201ENST00000555205 166 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.39□□□□□ -2.19
SCN2AQ99250 MIR4452-201ENST00000583004 71 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 AC243960.4-201ENST00000600532 288 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 SNORD14A-201ENST00000606526 91 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 AL627230.6-201ENST00000611129 280 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 AC130454.1-201ENST00000622948 401 ntBASIC1.39□□□□□ -2.19
SCN2AQ99250 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
SCN2AQ99250 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SCN2AQ99250 Y_RNA.279-201ENST00000364763 95 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 Y_RNA.404-201ENST00000383978 102 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 RNU6-842P-201ENST00000384269 107 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 MTND3P8-201ENST00000412909 339 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 RPL23AP3-201ENST00000453844 468 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN2AQ99250 TOMM22P6-201ENST00000465035 409 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 AC010409.1-201ENST00000487382 476 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 AC018868.1-201ENST00000491307 315 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 AC103851.1-201ENST00000506833 274 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN2AQ99250 RNU6-667P-201ENST00000517186 102 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.38□□□□□ -2.19
SCN2AQ99250 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN2AQ99250 AL022345.1-201ENST00000607292 135 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN2AQ99250 MIR6504-201ENST00000613520 61 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.38□□□□□ -2.19
SCN2AQ99250 RNU6-137P-201ENST00000363680 108 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 Y_RNA.473-201ENST00000384333 102 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 SNORD116-29-201ENST00000384516 83 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.37□□□□□ -2.19
SCN2AQ99250 AL035666.1-201ENST00000446195 348 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AL163540.1-201ENST00000485382 386 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN2AQ99250 AC091874.1-201ENST00000511402 339 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 Y_RNA.670-201ENST00000516255 105 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 MTND4LP26-201ENST00000518144 282 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN2AQ99250 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.37□□□□□ -2.19
SCN2AQ99250 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AL132765.2-201ENST00000610812 351 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN2AQ99250 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN2AQ99250 AL359314.1-201ENST00000616913 261 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC100810.6-201ENST00000638068 285 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 snoU2-30.2-201ENST00000362805 70 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 RNU6-53P-201ENST00000365367 106 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 SNORA18.2-201ENST00000383865 132 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 MT-TL1-201ENST00000386347 75 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 RNU6-1148P-201ENST00000410992 104 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC004965.1-201ENST00000413033 213 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SCN2AQ99250 RPL30P16-201ENST00000419341 429 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC012306.1-201ENST00000423267 114 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC074133.1-201ENST00000515696 183 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 RNA5SP454-201ENST00000517231 127 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 CBX3P8-201ENST00000532412 525 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.37□□□□□ -2.19
SCN2AQ99250 AC100830.2-201ENST00000581636 240 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 RPL17P51-201ENST00000605218 238 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AC018462.2-201ENST00000605375 395 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.37□□□□□ -2.19
SCN2AQ99250 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 AL359697.1-201ENST00000624879 587 ntBASIC1.37□□□□□ -2.19
SCN2AQ99250 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SCN2AQ99250 Y_RNA.166-201ENST00000363730 102 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 RNU6-873P-201ENST00000363833 107 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 SNORD115-32-201ENST00000364079 82 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SCN2AQ99250 MIR208B-201ENST00000401172 77 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 NCOR1P3-201ENST00000420479 303 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 USP9YP16-201ENST00000430287 407 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 RPS3AP52-201ENST00000435639 297 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 Z82188.1-201ENST00000436709 154 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN2AQ99250 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN2AQ99250 USP9YP23-201ENST00000455085 407 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 AC010531.2-201ENST00000465012 153 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 RNU6-344P-201ENST00000516635 111 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 RNA5SP490-201ENST00000517141 136 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 RNU1-54P-201ENST00000517181 120 ntBASIC1.36□□□□□ -2.19
SCN2AQ99250 AP003033.1-201ENST00000527244 415 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms