Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL080274.1-201ENST00000605565 220 ntBASIC2.39□□□□□ -2.03
SIN3AQ96ST3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.38□□□□□ -2.03
SIN3AQ96ST3 RNU6-490P-201ENST00000362985 107 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 RNA5SP99-201ENST00000364020 114 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 MIR153-2-201ENST00000385225 87 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 RNU2-48P-201ENST00000410694 191 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 MTCYBP10-201ENST00000424905 650 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 snoU13.23-201ENST00000458863 104 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 CKS1BP2-201ENST00000497342 240 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.38□□□□□ -2.03
SIN3AQ96ST3 RNU6-699P-201ENST00000517081 110 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 AC004584.2-201ENST00000570407 410 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 AL355297.2-201ENST00000604792 129 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 AC137590.2-201ENST00000619709 240 ntBASIC2.38□□□□□ -2.03
SIN3AQ96ST3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SIN3AQ96ST3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.37□□□□□ -2.03
SIN3AQ96ST3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.37□□□□□ -2.03
SIN3AQ96ST3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AL596028.1-201ENST00000326971 197 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.5-201ENST00000362334 102 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.11-201ENST00000362375 109 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 SNORD115-8-201ENST00000363856 82 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 SNORD115-38-201ENST00000365037 82 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 RNU6-700P-201ENST00000391043 107 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 CBX3P6-201ENST00000430257 527 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.37□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.639-201ENST00000458981 102 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AC007215.1-201ENST00000464893 276 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AC105758.1-201ENST00000506038 399 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 RNU6-264P-201ENST00000517134 104 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 DEFB131C-201ENST00000528817 165 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.37□□□□□ -2.03
SIN3AQ96ST3 MIR4658-201ENST00000584344 65 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AC104984.5-201ENST00000586878 94 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 7SK.7-201ENST00000603504 247 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 AC100812.1-201ENST00000607622 580 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 MIR1244-1-201ENST00000612829 85 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 MIR1244-3-201ENST00000635744 85 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 MIR1244-2-201ENST00000636449 85 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 MIR1244-4-202ENST00000636813 85 ntBASIC2.37□□□□□ -2.03
SIN3AQ96ST3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIN3AQ96ST3 MIR369-201ENST00000362155 70 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.197-201ENST00000364004 102 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.395-201ENST00000383945 109 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.496-201ENST00000384444 101 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 MIR190B-201ENST00000401119 79 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 RNU2-32P-201ENST00000411193 191 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.36□□□□□ -2.03
SIN3AQ96ST3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SIN3AQ96ST3 AC092423.1-201ENST00000430165 186 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.36□□□□□ -2.03
SIN3AQ96ST3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 MIR449C-201ENST00000516047 92 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 RNU6-965P-201ENST00000516721 96 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.706-201ENST00000516933 99 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 RNU6-58P-201ENST00000517143 103 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
SIN3AQ96ST3 AC024614.2-201ENST00000577584 372 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.36□□□□□ -2.03
SIN3AQ96ST3 AC087588.2-201ENST00000617667 426 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 AC091925.1-201ENST00000623204 462 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 AC022140.2-201ENST00000623500 188 ntBASIC2.36□□□□□ -2.03
SIN3AQ96ST3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
SIN3AQ96ST3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.36□□□□□ -2.03
SIN3AQ96ST3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SIN3AQ96ST3 RNU6-222P-201ENST00000362438 107 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.138-201ENST00000363462 102 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 RNU6-546P-201ENST00000383991 107 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 UBE2V1P7-201ENST00000446395 340 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AL139109.1-201ENST00000455491 297 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AP000870.1-201ENST00000472927 406 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.35□□□□□ -2.03
SIN3AQ96ST3 RNU6-1170P-201ENST00000515974 106 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.35□□□□□ -2.03
SIN3AQ96ST3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AC090517.1-201ENST00000569307 266 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AC009127.3-201ENST00000570531 403 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 CYP2C61P-201ENST00000604072 290 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 U4atac.1-201ENST00000618345 95 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 AC090971.5-201ENST00000621102 293 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 uc_338.22-201ENST00000622722 187 ntBASIC2.35□□□□□ -2.03
SIN3AQ96ST3 MIR1323-201ENST00000408090 73 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AL354751.2-201ENST00000415471 210 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AC007098.1-201ENST00000420122 367 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AC018865.2-201ENST00000423631 129 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AL445305.1-201ENST00000432577 575 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms