Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.35□□□□□ -2.46
IFT140Q96RY7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.35□□□□□ -2.46
IFT140Q96RY7 AL391840.1-201ENST00000571144 367 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 AC078795.3-201ENST00000602913 472 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 PART1_2.1-201ENST00000612397 250 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 AL359075.3-201ENST00000613288 217 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 U6.108-201ENST00000637764 58 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 RNY3P13-201ENST00000365542 102 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 RNU2-62P-201ENST00000410868 191 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 AL663109.1-201ENST00000411498 844 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 AL139396.1-201ENST00000421137 167 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 AC005002.2-201ENST00000438228 269 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.35□□□□□ -2.47
IFT140Q96RY7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.35□□□□□ -2.47
IFT140Q96RY7 AC026371.1-201ENST00000551867 419 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 Z99497.2-201ENST00000603634 310 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
IFT140Q96RY7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 AC090517.2-201ENST00000614966 680 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 AL031667.3-201ENST00000620124 655 ntBASIC-0.35□□□□□ -2.47
IFT140Q96RY7 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.35□□□□□ -2.47
IFT140Q96RY7 RNU6-354P-201ENST00000383862 107 ntBASIC-0.36□□□□□ -2.47
IFT140Q96RY7 RNU6-610P-201ENST00000384264 107 ntBASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC106883.1-201ENST00000418805 562 ntBASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC093850.1-201ENST00000454121 251 ntBASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.36□□□□□ -2.47
IFT140Q96RY7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC104136.1-201ENST00000512969 394 ntBASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
IFT140Q96RY7 BCRP9-201ENST00000605312 388 ntBASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC092574.1-201ENST00000609771 420 ntBASIC-0.36□□□□□ -2.47
IFT140Q96RY7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.36□□□□□ -2.47
IFT140Q96RY7 RNU6-562P-201ENST00000362731 107 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 RNU6-207P-201ENST00000384137 107 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 RNU6-975P-201ENST00000384296 105 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 RNU6-692P-201ENST00000384496 107 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 MIR549A-201ENST00000385268 96 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 MIR1284-201ENST00000408337 120 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 SNORD83.1-201ENST00000411362 77 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 MTATP6P16-201ENST00000434543 526 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 AC004584.2-201ENST00000570407 410 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
IFT140Q96RY7 AC009994.1-201ENST00000606889 253 ntBASIC-0.37□□□□□ -2.47
IFT140Q96RY7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.37□□□□□ -2.47
IFT140Q96RY7 snoZ40.1-201ENST00000364540 72 ntBASIC-0.38□□□□□ -2.47
IFT140Q96RY7 RN7SKP266-201ENST00000410232 287 ntBASIC-0.38□□□□□ -2.47
IFT140Q96RY7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.38□□□□□ -2.47
IFT140Q96RY7 RPS3AP3-201ENST00000411933 242 ntBASIC-0.38□□□□□ -2.47
IFT140Q96RY7 AL354692.1-201ENST00000423044 315 ntBASIC-0.38□□□□□ -2.47
IFT140Q96RY7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.38□□□□□ -2.47
IFT140Q96RY7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.38□□□□□ -2.47
IFT140Q96RY7 Z99289.3-201ENST00000605586 594 ntBASIC-0.38□□□□□ -2.47
IFT140Q96RY7 SNORA28-201ENST00000606769 126 ntBASIC-0.38□□□□□ -2.47
IFT140Q96RY7 RNU6-552P-201ENST00000362869 119 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 RNU6-654P-201ENST00000364373 107 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 MIR610-201ENST00000385139 96 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 MIR208B-201ENST00000401172 77 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.39□□□□□ -2.47
IFT140Q96RY7 AC090960.1-201ENST00000421072 306 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 AC091874.1-201ENST00000511402 339 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
IFT140Q96RY7 RNU6-377P-201ENST00000515965 102 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 OR8K2P-201ENST00000524645 927 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 AP003716.2-201ENST00000528260 108 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 MIR3612-201ENST00000579753 87 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 MIR4764-201ENST00000580680 88 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 VN1R87P-201ENST00000596706 487 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 SNORA25.18-201ENST00000607153 114 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 MIR1295B-201ENST00000636144 60 ntBASIC-0.39□□□□□ -2.47
IFT140Q96RY7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
IFT140Q96RY7 SNORA25.3-201ENST00000363205 127 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 RNU6-511P-201ENST00000363496 107 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 SNORD113.3-201ENST00000364630 78 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 MIR1185-1-201ENST00000408598 86 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 AL360271.2-201ENST00000447710 161 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.4□□□□□ -2.47
IFT140Q96RY7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.4□□□□□ -2.47
IFT140Q96RY7 AC016632.1-201ENST00000503994 196 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.4□□□□□ -2.47
IFT140Q96RY7 RNU6-567P-201ENST00000516746 107 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 ADI1P3-201ENST00000549509 470 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 AC104695.3-201ENST00000604052 296 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 AC097478.2-201ENST00000610572 514 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 AC122133.1-201ENST00000613964 233 ntBASIC-0.4□□□□□ -2.47
IFT140Q96RY7 RNU6-236P-201ENST00000363886 106 ntBASIC-0.41□□□□□ -2.47
IFT140Q96RY7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.41□□□□□ -2.47
IFT140Q96RY7 RNA5SP266-201ENST00000410273 108 ntBASIC-0.41□□□□□ -2.47
IFT140Q96RY7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.41□□□□□ -2.47
IFT140Q96RY7 AL353777.1-201ENST00000425552 326 ntBASIC-0.41□□□□□ -2.47
IFT140Q96RY7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.41□□□□□ -2.47
IFT140Q96RY7 CALM2P4-201ENST00000430810 426 ntBASIC-0.41□□□□□ -2.47
IFT140Q96RY7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.41□□□□□ -2.47
IFT140Q96RY7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.41□□□□□ -2.47
IFT140Q96RY7 snoU13.11-201ENST00000459219 104 ntBASIC-0.41□□□□□ -2.47
IFT140Q96RY7 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.41□□□□□ -2.47
IFT140Q96RY7 RNU7-12P-201ENST00000516030 62 ntBASIC-0.41□□□□□ -2.47
IFT140Q96RY7 RNU2-10P-201ENST00000516375 211 ntBASIC-0.41□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms