Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.16□□□□□ -2.22
USP47Q96K76 MTCO2P18-201ENST00000457151 658 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 TPTE2P5-203ENST00000458118 728 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 snoU13.27-201ENST00000459278 104 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.16□□□□□ -2.22
USP47Q96K76 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 RNU6-1038P-201ENST00000516516 104 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 AC087854.1-201ENST00000519706 414 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 AC015688.6-201ENST00000577737 104 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 MIR4424-201ENST00000585257 86 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 AP000907.4-201ENST00000604143 237 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 TCL6_2.1-201ENST00000615162 119 ntBASIC1.16□□□□□ -2.22
USP47Q96K76 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.16□□□□□ -2.22
USP47Q96K76 RNU6-1317P-201ENST00000364582 104 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 SNORA4.2-201ENST00000365313 147 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 RNU6-1103P-201ENST00000384150 107 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 AL049545.1-201ENST00000401856 572 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 AL353193.1-201ENST00000421444 268 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 AL606489.2-201ENST00000433886 234 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 AC104576.1-201ENST00000524225 88 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 MRPS36P4-201ENST00000534436 298 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 AC016256.1-201ENST00000547971 354 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 AC019288.1-201ENST00000557918 224 ntBASIC1.15□□□□□ -2.23
USP47Q96K76 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.15□□□□□ -2.23
USP47Q96K76 RNU5B-2P-201ENST00000363036 113 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 MIR194-1-201ENST00000384892 85 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 COX6CP10-201ENST00000416832 224 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 MTCO2P19-201ENST00000427513 598 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 USP9YP14-201ENST00000430663 563 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 BET1P1-201ENST00000482276 359 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 RNU6-189P-201ENST00000516120 101 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 RNU2-34P-201ENST00000516534 121 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 Y_RNA.695-201ENST00000516715 107 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 CENPUP1-201ENST00000526649 1202 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 AC025423.5-201ENST00000550230 219 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
USP47Q96K76 AL353149.1-201ENST00000610667 244 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 AC008133.2-201ENST00000624540 351 ntBASIC1.14□□□□□ -2.23
USP47Q96K76 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USP47Q96K76 Y_RNA.123-201ENST00000363338 102 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 RNU6-975P-201ENST00000384296 105 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 EIF1P1-201ENST00000421436 341 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.13□□□□□ -2.23
USP47Q96K76 AC004941.2-201ENST00000427009 228 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 NFU1P2-201ENST00000448700 469 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 MTCO3P8-201ENST00000453691 755 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 RPL30P7-201ENST00000479312 323 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.13□□□□□ -2.23
USP47Q96K76 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.13□□□□□ -2.23
USP47Q96K76 DEFB108E-201ENST00000524692 240 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 CYP3A52P-201ENST00000563326 91 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 AC073648.5-201ENST00000603502 305 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.13□□□□□ -2.23
USP47Q96K76 AL357078.3-201ENST00000607528 618 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 RMST_3.1-201ENST00000611651 109 ntBASIC1.13□□□□□ -2.23
USP47Q96K76 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.13□□□□□ -2.23
USP47Q96K76 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
USP47Q96K76 RNU6-1329P-201ENST00000365664 107 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 SNORA75-201ENST00000384158 137 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 SNORD37.1-201ENST00000390968 65 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.12□□□□□ -2.23
USP47Q96K76 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
USP47Q96K76 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.12□□□□□ -2.23
USP47Q96K76 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.12□□□□□ -2.23
USP47Q96K76 U8.21-201ENST00000459536 136 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 RPS3AP17-201ENST00000472594 777 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.12□□□□□ -2.23
USP47Q96K76 RNU6-1069P-201ENST00000516612 133 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.12□□□□□ -2.23
USP47Q96K76 AC026470.2-201ENST00000561492 181 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.12□□□□□ -2.23
USP47Q96K76 MIR4709-201ENST00000577272 72 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 AC092747.3-201ENST00000603769 301 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 AL121757.2-201ENST00000611223 313 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 AC103705.1-201ENST00000619013 241 ntBASIC1.12□□□□□ -2.23
USP47Q96K76 RNA5SP327-201ENST00000362494 101 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 SNORA33-201ENST00000363664 130 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 RNU6-1305P-201ENST00000364353 104 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 RNU6-1286P-201ENST00000383871 107 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 RNU6-1065P-201ENST00000384513 106 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 RNU6-1235P-201ENST00000384559 107 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 RNU6-417P-201ENST00000384712 107 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 AC004866.1-201ENST00000411748 78 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 SNX2P2-201ENST00000424553 323 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 RNU6-956P-201ENST00000458868 103 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 RNU6-498P-201ENST00000459468 107 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 AC114982.1-201ENST00000469402 321 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 Z99497.2-201ENST00000603634 310 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 AC121247.2-201ENST00000604776 136 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 AL158063.1-201ENST00000615349 536 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 AC006001.4-201ENST00000622243 395 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 AL359697.1-201ENST00000624879 587 ntBASIC1.11□□□□□ -2.23
USP47Q96K76 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
USP47Q96K76 Y_RNA.1-201ENST00000352915 104 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 snoU2-30.2-201ENST00000362805 70 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 Y_RNA.178-201ENST00000363832 102 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 RNU6-82P-201ENST00000363970 107 ntBASIC1.1□□□□□ -2.23
USP47Q96K76 SNORA25.8-201ENST00000364831 128 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms