Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.35□□□□□ -1.87
CHAMP1Q96JM3 SNRPGP20-201ENST00000604477 205 ntBASIC3.35□□□□□ -1.87
CHAMP1Q96JM3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.35□□□□□ -1.87
CHAMP1Q96JM3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.35□□□□□ -1.87
CHAMP1Q96JM3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHAMP1Q96JM3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CHAMP1Q96JM3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 Y_RNA.83-201ENST00000363005 113 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 SNORA18.3-201ENST00000384122 132 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 RPL23AP36-201ENST00000413895 458 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 AC003982.1-202ENST00000469928 248 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 AC091959.1-201ENST00000495857 238 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 RNA5SP356-201ENST00000515972 94 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 SNORA27.4-201ENST00000516650 95 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 RN7SKP40-201ENST00000517211 242 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 RPL21P9-201ENST00000556149 474 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 AL162424.1-201ENST00000602325 221 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 AC004467.1-201ENST00000615678 330 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 AC091932.3-201ENST00000624223 323 ntBASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CHAMP1Q96JM3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CHAMP1Q96JM3 MIR411-201ENST00000362239 96 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.82-201ENST00000363000 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.92-201ENST00000363043 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 RNU6-727P-201ENST00000363592 107 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.180-201ENST00000363867 113 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.199-201ENST00000364014 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.235-201ENST00000364412 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.306-201ENST00000365015 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.312-201ENST00000365089 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.322-201ENST00000365151 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 PCNPP3-201ENST00000393579 471 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 RN7SKP220-201ENST00000410611 288 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 AC009414.1-201ENST00000427200 443 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 AL138752.1-201ENST00000452964 351 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 AC005042.3-201ENST00000453230 174 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.650-201ENST00000459002 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 AC145146.1-201ENST00000496370 254 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 SNORD116-28-201ENST00000516123 91 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.777-201ENST00000516982 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.771-201ENST00000598668 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 AC006001.4-201ENST00000622243 395 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.789-201ENST00000622480 102 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
CHAMP1Q96JM3 SNORA25.1-201ENST00000362326 128 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 RNU6-655P-201ENST00000362858 107 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.150-201ENST00000363562 102 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.292-201ENST00000364904 97 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 RNA5SP504-201ENST00000410676 117 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.626-201ENST00000411288 95 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 POLR2KP2-201ENST00000438155 177 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.644-201ENST00000459006 113 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 RPL36AP48-201ENST00000485521 314 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 RPS27P26-201ENST00000494583 239 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.674-201ENST00000516362 113 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 AC091544.4-201ENST00000555268 342 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 AC037487.3-201ENST00000606668 112 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 MIR622-201ENST00000638396 96 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 AC092593.1-201ENST00000515413 1815 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
CHAMP1Q96JM3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 U3.9-201ENST00000363823 204 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.415-201ENST00000384012 112 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 RNU6-886P-201ENST00000384319 105 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 SNORA46.1-201ENST00000391069 153 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 AC022018.1-201ENST00000430685 241 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 SNORD2.1-201ENST00000458762 69 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 COX6CP14-201ENST00000469580 174 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 RNU6-344P-201ENST00000516635 111 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 AC026470.2-201ENST00000561492 181 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 AC005562.2-201ENST00000618264 111 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.31□□□□□ -1.88
CHAMP1Q96JM3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms