Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNU1-54P-201ENST00000517181 120 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 MTND5P9-201ENST00000503854 1755 ntBASIC1.74□□□□□ -2.13
SNRNP40Q96DI7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 MIR340-201ENST00000362125 95 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 Y_RNA.160-201ENST00000363677 92 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 Y_RNA.339-201ENST00000365325 102 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 RNU6-767P-201ENST00000384132 107 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 RNA5SP100-201ENST00000410903 110 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 RNA5SP59-201ENST00000410922 110 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AC112492.4-201ENST00000456549 352 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 SNORD5.1-201ENST00000458800 75 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 SNORD13-201ENST00000459299 104 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AC007215.1-201ENST00000464893 276 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 HMGN1P13-201ENST00000505795 138 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 MIR4790-201ENST00000577799 79 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 MIR3683-201ENST00000580847 82 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AC069114.2-201ENST00000604699 304 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AC099654.14-201ENST00000638599 341 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 AP000553.5-201ENST00000641933 54 ntBASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SNRNP40Q96DI7 MTND4P1-201ENST00000457501 1466 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 RNU6-845P-201ENST00000362578 103 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 RNA5SP160-201ENST00000364866 120 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 MIR153-2-201ENST00000385225 87 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 RNU6-174P-201ENST00000410406 106 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 BTF3P4-201ENST00000418852 495 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 RNU6-717P-201ENST00000459076 104 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 AC067942.3-201ENST00000512025 362 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 Y_RNA.682-201ENST00000516457 100 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 SNORA20.3-201ENST00000516880 132 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 MIR5696-201ENST00000578474 85 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 AC022306.2-201ENST00000617563 647 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 AC098657.3-201ENST00000620434 263 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 BX322639.1-202ENST00000423987 2213 ntBASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SNRNP40Q96DI7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 RNU6-862P-201ENST00000362804 105 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 RNU1-96P-201ENST00000364163 162 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.390-201ENST00000383932 102 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 U8.10-201ENST00000384260 133 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 RNU6-876P-201ENST00000391295 104 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 PDCL2P1-201ENST00000419302 352 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 snoU13.30-201ENST00000458951 104 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 PRDX4P1-201ENST00000507189 574 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.691-201ENST00000516611 103 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 RNU6-856P-201ENST00000516959 98 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 RNU1-117P-201ENST00000517041 158 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 AC002984.1-201ENST00000591692 448 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 MIR7111-201ENST00000619751 72 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 AC084768.2-201ENST00000622736 221 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 AL078596.1-201ENST00000624856 447 ntBASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SNRNP40Q96DI7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.184-201ENST00000363884 108 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 SNORD115-32-201ENST00000364079 82 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 RNU6-593P-201ENST00000364716 112 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 RNU4-52P-201ENST00000384209 138 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 RNU6-842P-201ENST00000384269 107 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 AL627390.1-201ENST00000396055 340 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 MIR548F5-201ENST00000408421 86 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 AC138393.2-201ENST00000414742 246 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 AC243428.1-201ENST00000421099 264 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 USP9YP30-201ENST00000430729 455 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 AC016717.1-201ENST00000448918 286 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 RPL23AP7-203ENST00000449021 469 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 RNU6-1016P-201ENST00000516689 94 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 RNU7-30P-201ENST00000516835 62 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 SNORA31.17-201ENST00000516953 127 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 SUB1P4-201ENST00000566062 339 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 MIR8081-201ENST00000611533 95 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 MIR6128-201ENST00000615528 109 ntBASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms