Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC073349.3-201ENST00000617616 186 ntBASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
ZNF439Q8NDP4 Y_RNA.238-201ENST00000364441 102 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 RNU4-48P-201ENST00000365559 182 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 MIR660-201ENST00000385235 97 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 SNORD73A-201ENST00000386062 65 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 MTND3P17-201ENST00000416968 344 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 RPL31P35-201ENST00000431058 377 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 MTCO3P8-201ENST00000453691 755 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 RNU7-57P-201ENST00000459540 60 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 RPS29P27-201ENST00000463711 170 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AC010493.1-201ENST00000513479 292 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 RNA5SP220-201ENST00000516298 104 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AC004584.2-201ENST00000570407 410 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AC068790.2-201ENST00000602601 557 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 RNU6-85P-201ENST00000605989 107 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AP001596.2-201ENST00000608410 312 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AC006566.1-201ENST00000608943 513 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 AC022306.3-201ENST00000619930 550 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 MTND4P5-201ENST00000435821 1374 ntBASIC0.39□□□□□ -2.35
ZNF439Q8NDP4 MTND4P4-201ENST00000439033 1366 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 RNU6-1305P-201ENST00000364353 104 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 RNU6-282P-201ENST00000365357 103 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 RNU6-440P-201ENST00000390882 105 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 MRPL42P3-201ENST00000401492 326 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AC245047.3-201ENST00000429428 127 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AL035398.1-201ENST00000430869 322 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AC098869.1-201ENST00000481627 292 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 MTND2P14-201ENST00000482139 351 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 MTND3P3-201ENST00000505004 126 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 HMGB1P29-201ENST00000505659 499 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AC090049.2-201ENST00000550377 109 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 MIR5583-1-201ENST00000580941 59 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AL357312.1-201ENST00000603879 298 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AP000907.4-201ENST00000604143 237 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 AC097065.2-201ENST00000608159 533 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 snoZ196.1-201ENST00000625269 89 ntBASIC0.38□□□□□ -2.35
ZNF439Q8NDP4 RNU6-227P-201ENST00000362865 103 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 RNU5B-2P-201ENST00000363036 113 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 RNU6-1240P-201ENST00000365155 104 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 SNORA67.2-201ENST00000384300 149 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 RNU6-297P-201ENST00000384636 107 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 MIR487A-201ENST00000385009 80 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 AL355796.1-201ENST00000406706 323 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 RNU6-57P-201ENST00000411348 103 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 RPL39P39-201ENST00000455840 151 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 AC022364.2-201ENST00000457963 554 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 RNU7-167P-201ENST00000459160 62 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 AC007215.1-201ENST00000464893 276 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 MTATP6P9-201ENST00000515039 680 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 AC025647.1-201ENST00000517879 253 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 MRPS36P4-201ENST00000534436 298 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 BNIP3P39-201ENST00000601077 554 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 AC025449.1-201ENST00000603896 529 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 SNRPGP20-201ENST00000604477 205 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 MIR98-201ENST00000606724 119 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.37□□□□□ -2.35
ZNF439Q8NDP4 CASC19-280ENST00000642102 1351 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNU6-199P-201ENST00000362954 107 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNU1-133P-201ENST00000364867 167 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNU6-606P-201ENST00000384721 111 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 SNORA75.2-201ENST00000391138 150 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 SNORA75.3-201ENST00000391231 150 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AL451046.2-201ENST00000403074 277 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNA5SP494-201ENST00000410653 129 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 FABP5P4-201ENST00000437203 171 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNU7-21P-201ENST00000459430 62 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNU6-221P-201ENST00000459541 99 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AC005178.1-201ENST00000508392 440 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AC025465.4-201ENST00000513422 638 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNU6-612P-201ENST00000516909 102 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RNU7-128P-201ENST00000517247 62 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms