Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL353621.2-201ENST00000605340 133 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.812-201ENST00000610788 101 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.784-201ENST00000613803 101 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.787-201ENST00000616522 101 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.780-201ENST00000617336 101 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 AC007742.2-201ENST00000618226 398 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 AL138825.1-201ENST00000618587 192 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.801-201ENST00000619005 101 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.80-201ENST00000362996 102 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 RNY3P11-201ENST00000364153 102 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 SNORA33.2-201ENST00000365413 134 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.358-201ENST00000365491 99 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 SNORA80E-201ENST00000384744 137 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 HMGN2P3-201ENST00000433603 273 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 HMGN2P5-201ENST00000436882 273 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 AC112492.4-201ENST00000456549 352 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 snoU13.23-201ENST00000458863 104 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 U8.22-201ENST00000459141 133 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 AC132942.1-201ENST00000486753 483 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 DEFB131C-201ENST00000528817 165 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 CYCSP26-201ENST00000534107 320 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 U2.1-201ENST00000618978 145 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 AC099654.10-201ENST00000640395 161 ntBASIC2.48□□□□□ -2.01
VPS52Q8N1B4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS52Q8N1B4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS52Q8N1B4 SNORD114-1-201ENST00000362705 72 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 RNU1-76P-201ENST00000362903 159 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 RNU1-23P-201ENST00000363361 144 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC117470.1-201ENST00000381974 330 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 RNU6-281P-201ENST00000384212 103 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS52Q8N1B4 RNU7-87P-201ENST00000459343 62 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC107032.1-201ENST00000485945 480 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS52Q8N1B4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS52Q8N1B4 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.47□□□□□ -2.01
VPS52Q8N1B4 ANP32BP3-201ENST00000559213 706 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 UBL5P4-201ENST00000562584 236 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC090517.1-201ENST00000569307 266 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 MIR5007-201ENST00000583098 95 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 SNRPGP20-201ENST00000604477 205 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC005562.2-201ENST00000618264 111 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 U4atac.1-201ENST00000618345 95 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 ZNF204P-201ENST00000416749 2397 ntBASIC2.47□□□□□ -2.01
VPS52Q8N1B4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS52Q8N1B4 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.01
VPS52Q8N1B4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS52Q8N1B4 RNU5F-3P-201ENST00000363767 117 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 RNU6-873P-201ENST00000363833 107 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 RNU6-280P-201ENST00000364145 104 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AL079342.1-201ENST00000401460 267 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 MRPL42P3-201ENST00000401492 326 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 MIR1294-201ENST00000408503 142 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 Y_RNA.605-201ENST00000410577 105 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 RNU2-48P-201ENST00000410694 191 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC114482.1-201ENST00000418010 247 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 WARS2P1-201ENST00000429678 537 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AL591806.2-201ENST00000433122 173 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS52Q8N1B4 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC091144.1-201ENST00000519573 138 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC022616.8-201ENST00000533569 253 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS52Q8N1B4 MIR5188-201ENST00000583467 113 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC125232.2-201ENST00000592457 143 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AL355297.2-201ENST00000604792 129 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 TCL6_2.1-201ENST00000615162 119 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS52Q8N1B4 AC005592.1-201ENST00000566527 1640 ntBASIC2.46□□□□□ -2.02
VPS52Q8N1B4 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 RNU6-1301P-201ENST00000362724 104 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 RNU6-26P-201ENST00000383985 107 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 RNU6-546P-201ENST00000383991 107 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 MIR764-201ENST00000390811 85 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AL590004.1-201ENST00000405321 300 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AL355497.1-201ENST00000406262 551 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 MIR320B2-201ENST00000408479 138 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AC004866.1-201ENST00000411748 78 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AC096644.2-201ENST00000429278 159 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.45□□□□□ -2.02
VPS52Q8N1B4 IFNA11P-201ENST00000446352 526 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 RNU7-169P-201ENST00000459456 61 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AC018868.1-201ENST00000491307 315 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 CKS1BP2-201ENST00000497342 240 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AC093852.1-201ENST00000503587 266 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 174.2 ms