Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC016957.1-201ENST00000534895 309 ntBASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 MIR4524B-201ENST00000581569 115 ntBASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 AL050343.2-201ENST00000607338 280 ntBASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
NUDCD3Q8IVD9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.21
NUDCD3Q8IVD9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 SNORD50.1-201ENST00000362987 71 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-1252P-201ENST00000363054 104 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 RNA5SP99-201ENST00000364020 114 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 Y_RNA.373-201ENST00000365600 103 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-483P-201ENST00000384088 108 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 Y_RNA.615-201ENST00000410769 117 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-57P-201ENST00000411348 103 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 TOMM22P2-201ENST00000430735 237 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AC027119.1-201ENST00000440877 241 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 MTND1P29-201ENST00000448112 647 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 RNU7-57P-201ENST00000459540 60 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AL161670.1-201ENST00000554348 137 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AC092954.2-201ENST00000609103 430 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AL512598.1-201ENST00000610158 273 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 AC137590.2-201ENST00000619709 240 ntBASIC1.21□□□□□ -2.22
NUDCD3Q8IVD9 Y_RNA.151-201ENST00000363566 112 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 SNORD116-2-201ENST00000384274 95 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 SNORA67.2-201ENST00000384300 149 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-790P-201ENST00000384479 105 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 SNORD116-6-201ENST00000384711 96 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-417P-201ENST00000384712 107 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-908P-201ENST00000410160 94 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 RNU2-16P-201ENST00000410712 136 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 NDUFA5P4-201ENST00000436704 385 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 AC074290.1-201ENST00000448883 135 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 AC079354.2-201ENST00000453523 154 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 RNU1-117P-201ENST00000517041 158 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 PIGPP4-201ENST00000584447 307 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 NBR2-204ENST00000587322 63 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 AL162413.1-201ENST00000603198 110 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 DISC2.1-201ENST00000612827 205 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 AL121890.5-201ENST00000620848 304 ntBASIC1.2□□□□□ -2.22
NUDCD3Q8IVD9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 SNORA72.2-201ENST00000365028 127 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-128P-201ENST00000383976 107 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 MIR194-1-201ENST00000384892 85 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AL590002.1-201ENST00000406554 418 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 MIR320B2-201ENST00000408479 138 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AC016909.1-201ENST00000415916 166 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 COX6CP10-201ENST00000416832 224 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AL353572.1-201ENST00000442490 417 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 RN7SKP210-201ENST00000459176 261 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 ZNF519P2-201ENST00000557032 169 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 MIR3937-201ENST00000580135 106 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AL078604.3-201ENST00000615580 211 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AL078596.1-201ENST00000624856 447 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 AC008873.1-201ENST00000625051 138 ntBASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-95P-201ENST00000384697 107 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 SNORA17.3-201ENST00000391159 129 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 RNA5SP467-201ENST00000391274 118 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 RNA5SP504-201ENST00000410676 117 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 AL590632.1-201ENST00000424289 371 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 Z82205.1-201ENST00000428456 297 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 Z82188.1-201ENST00000436709 154 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 PCMTD1P1-201ENST00000455560 355 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-1146P-201ENST00000516282 102 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 RNU6-344P-201ENST00000516635 111 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 MIR4709-201ENST00000577272 72 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 MIR4742-201ENST00000581069 85 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
NUDCD3Q8IVD9 AC097065.2-201ENST00000608159 533 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms