Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MIR320B2-201ENST00000408479 138 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 AC004386.2-201ENST00000441858 148 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 AC016925.1-201ENST00000458303 298 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 RPL30P10-201ENST00000488148 337 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 Y_RNA.676-201ENST00000516393 96 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 CBX3P8-201ENST00000532412 525 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC71Q8IV32 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC71Q8IV32 MIR548S-201ENST00000581352 82 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC71Q8IV32 AC016727.1-205ENST00000605437 569 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 AC009229.3-201ENST00000608056 282 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC71Q8IV32 AL359697.1-201ENST00000624879 587 ntBASIC1.72□□□□□ -2.13
CCDC71Q8IV32 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC71Q8IV32 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC71Q8IV32 Y_RNA.2-201ENST00000362330 96 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.164-201ENST00000363709 102 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 RNU6-438P-201ENST00000365561 103 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.473-201ENST00000384333 102 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 SNORA12.2-201ENST00000391040 156 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 AC009237.7-201ENST00000447357 229 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 MTCO3P8-201ENST00000453691 755 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC71Q8IV32 AC091951.2-201ENST00000500762 203 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 RNU6-58P-201ENST00000517143 103 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 AC105029.1-201ENST00000520250 669 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 MIR5701-3-201ENST00000578890 82 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC71Q8IV32 AC005899.2-201ENST00000584353 90 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 MIR5701-1-201ENST00000585138 82 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 AC025253.1-201ENST00000613623 543 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 MIR5701-2-201ENST00000615634 82 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 PISRT1.1-201ENST00000616930 107 ntBASIC1.71□□□□□ -2.14
CCDC71Q8IV32 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC71Q8IV32 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC71Q8IV32 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC71Q8IV32 RNU1-58P-201ENST00000362413 163 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.48-201ENST00000362710 103 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 SNORA16.1-201ENST00000364597 132 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.404-201ENST00000383978 102 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 RNU6-245P-201ENST00000384020 107 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 MIR487A-201ENST00000385009 80 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 SNORA75.4-201ENST00000391278 119 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 MIR300-201ENST00000401138 83 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 MIR1283-2-201ENST00000408621 87 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.595-201ENST00000410403 105 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 RNU4-14P-201ENST00000410858 122 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC71Q8IV32 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC71Q8IV32 USMG5P1-201ENST00000425964 177 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC71Q8IV32 RNU1-131P-201ENST00000458943 161 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 MTND4P17-201ENST00000470444 350 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 RNU6-307P-201ENST00000516743 106 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC71Q8IV32 AC027288.2-201ENST00000553028 243 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC71Q8IV32 MIR5006-201ENST00000583027 110 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 AC113139.1-201ENST00000605049 239 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 AC005014.2-201ENST00000607795 599 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 AC005296.1-201ENST00000616145 209 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 LINC02555-201ENST00000563933 1951 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 ZNF204P-201ENST00000416749 2397 ntBASIC1.7□□□□□ -2.14
CCDC71Q8IV32 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC71Q8IV32 SNORD115-3-201ENST00000363100 82 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.319-201ENST00000365138 92 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.405-201ENST00000383979 100 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.451-201ENST00000384200 100 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 RNY3P14-201ENST00000384309 102 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 RNU6-1026P-201ENST00000384465 108 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.524-201ENST00000384564 100 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 RNU6-160P-201ENST00000384591 107 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.561-201ENST00000384694 100 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 RNA5SP465-201ENST00000391195 109 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC71Q8IV32 BX510359.4-201ENST00000423750 193 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 AC108667.1-201ENST00000428618 249 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 MTND5P20-201ENST00000448677 143 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 AC007395.1-201ENST00000451333 677 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 RPL7P42-201ENST00000481005 679 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC71Q8IV32 RNU6-875P-201ENST00000516488 106 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 RNA5SP384-201ENST00000516615 116 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 AC134698.4-201ENST00000523451 826 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 MIR5690-201ENST00000583739 73 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 AC100812.1-201ENST00000607622 580 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 AC092794.2-201ENST00000620933 563 ntBASIC1.69□□□□□ -2.14
CCDC71Q8IV32 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
CCDC71Q8IV32 MIR340-201ENST00000362125 95 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 SNORD114-6-201ENST00000364393 72 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 Y_RNA.238-201ENST00000364441 102 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 MIR549A-201ENST00000385268 96 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 RNU6-159P-201ENST00000391080 106 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 SNORA17.3-201ENST00000391159 129 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 AL512604.1-201ENST00000404812 257 ntBASIC1.68□□□□□ -2.14
CCDC71Q8IV32 MIR1283-1-201ENST00000408494 87 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms