Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
NPHP3Q7Z494 RNU4-56P-201ENST00000364700 142 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 SNORD81.2-201ENST00000365153 76 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 Y_RNA.339-201ENST00000365325 102 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 RNU6-1286P-201ENST00000383871 107 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 MIR29C-201ENST00000385231 88 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 MIR208B-201ENST00000401172 77 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2□□□□□ -2.09
NPHP3Q7Z494 AL139396.1-201ENST00000421137 167 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 RPS3AP52-201ENST00000435639 297 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2□□□□□ -2.09
NPHP3Q7Z494 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2□□□□□ -2.09
NPHP3Q7Z494 AC245102.2-201ENST00000448956 180 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2□□□□□ -2.09
NPHP3Q7Z494 AC079354.2-201ENST00000453523 154 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 AF186996.7-201ENST00000492781 209 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2□□□□□ -2.09
NPHP3Q7Z494 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2□□□□□ -2.09
NPHP3Q7Z494 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2□□□□□ -2.09
NPHP3Q7Z494 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2□□□□□ -2.09
NPHP3Q7Z494 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2□□□□□ -2.09
NPHP3Q7Z494 AL022345.1-201ENST00000607292 135 ntBASIC2□□□□□ -2.09
NPHP3Q7Z494 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NPHP3Q7Z494 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NPHP3Q7Z494 RNU5B-2P-201ENST00000363036 113 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 SNORD32B-201ENST00000364460 84 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.99□□□□□ -2.09
NPHP3Q7Z494 RNU6-842P-201ENST00000384269 107 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 SNORD14D-201ENST00000384390 87 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 MIR549A-201ENST00000385268 96 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 RNA5SP494-201ENST00000410653 129 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.99□□□□□ -2.09
NPHP3Q7Z494 AC098614.3-201ENST00000438957 440 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 DAP3P1-201ENST00000441522 278 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 MTND4P17-201ENST00000470444 350 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 ACA59.1-201ENST00000515966 143 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 RNU1-54P-201ENST00000517181 120 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 AC005668.1-201ENST00000571142 476 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 AC005730.3-201ENST00000583067 366 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.99□□□□□ -2.09
NPHP3Q7Z494 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.99□□□□□ -2.09
NPHP3Q7Z494 Y_RNA.48-201ENST00000362710 103 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 MIR487A-201ENST00000385009 80 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 RNU6-1093P-201ENST00000391194 107 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC074085.1-201ENST00000413598 418 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 Z82188.1-201ENST00000436709 154 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 RPL23AP3-201ENST00000453844 468 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 RPL23AP75-201ENST00000491601 451 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC008749.1-201ENST00000597650 306 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC243960.4-201ENST00000600532 288 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AL359314.1-201ENST00000616913 261 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
NPHP3Q7Z494 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
NPHP3Q7Z494 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
NPHP3Q7Z494 RNU1-22P-201ENST00000363334 158 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 SNORA72.1-201ENST00000363485 129 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 U3.9-201ENST00000363823 204 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 RNU4-14P-201ENST00000410858 122 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 RNU2-41P-201ENST00000410991 178 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 SRIP3-201ENST00000413200 219 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 CBX3P6-201ENST00000430257 527 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.97□□□□□ -2.09
NPHP3Q7Z494 AC107399.1-201ENST00000451226 265 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 AC087477.1-201ENST00000465747 340 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 RNU6-567P-201ENST00000516746 107 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 AP005660.1-201ENST00000522972 293 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.97□□□□□ -2.09
NPHP3Q7Z494 EIF4A1P12-201ENST00000551910 141 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.97□□□□□ -2.09
NPHP3Q7Z494 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 AL355073.2-201ENST00000612106 557 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.97□□□□□ -2.09
NPHP3Q7Z494 TPTEP1-208ENST00000636884 213 ntBASIC1.97□□□□□ -2.09
NPHP3Q7Z494 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.97□□□□□ -2.09
NPHP3Q7Z494 Y_RNA.88-201ENST00000363029 99 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.166-201ENST00000363730 102 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 RNU1-93P-201ENST00000364704 169 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 Y_RNA.533-201ENST00000384596 114 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AL356432.1-201ENST00000405809 419 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 SNORD5.1-201ENST00000458800 75 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC026782.1-201ENST00000512952 449 ntBASIC1.96□□□□□ -2.1
NPHP3Q7Z494 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.96□□□□□ -2.1
NPHP3Q7Z494 AC016256.1-201ENST00000547971 354 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms