Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 MIR2355-201ENST00000517199 87 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 MIR4435-1-201ENST00000582552 80 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 SCARNA4-202ENST00000625402 129 ntBASIC2.45□□□□□ -2.02
USP43Q70EL4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
USP43Q70EL4 RNA5SP205-201ENST00000364653 136 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 Y_RNA.353-201ENST00000365440 108 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 Y_RNA.497-201ENST00000384447 98 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 RNU2-61P-201ENST00000411069 191 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 AL162725.1-201ENST00000435405 301 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 Z82188.1-201ENST00000436709 154 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.44□□□□□ -2.02
USP43Q70EL4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.44□□□□□ -2.02
USP43Q70EL4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.44□□□□□ -2.02
USP43Q70EL4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.44□□□□□ -2.02
USP43Q70EL4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.44□□□□□ -2.02
USP43Q70EL4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 AC006445.2-201ENST00000510061 472 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 RNU2-31P-201ENST00000516954 155 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 IGLV3-17-201ENST00000519099 244 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.44□□□□□ -2.02
USP43Q70EL4 AP000867.2-201ENST00000532468 320 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 AC027288.2-201ENST00000553028 243 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 MIR3945-201ENST00000581853 98 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.44□□□□□ -2.02
USP43Q70EL4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.44□□□□□ -2.02
USP43Q70EL4 AC010928.2-201ENST00000588017 287 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 AC024153.1-201ENST00000603103 365 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 AC097372.5-201ENST00000623665 376 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP43Q70EL4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USP43Q70EL4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
USP43Q70EL4 AL136360.1-201ENST00000503377 1900 ntBASIC2.44□□□□□ -2.02
USP43Q70EL4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USP43Q70EL4 AC010680.1-201ENST00000590024 3590 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
USP43Q70EL4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.43□□□□□ -2.02
USP43Q70EL4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.43□□□□□ -2.02
USP43Q70EL4 RNU6-942P-201ENST00000363002 107 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 Y_RNA.123-201ENST00000363338 102 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RNU6-270P-201ENST00000364131 105 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RNU6-217P-201ENST00000384164 104 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RNU6-140P-201ENST00000384566 108 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 SNORD78.2-201ENST00000391076 69 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AL033519.2-201ENST00000403958 392 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RNU4-30P-201ENST00000410245 143 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.43□□□□□ -2.02
USP43Q70EL4 Z82209.1-201ENST00000422141 2135 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AL512844.2-201ENST00000433990 593 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RPS15AP7-201ENST00000439294 405 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RPS12P2-201ENST00000439728 269 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AL135938.1-201ENST00000443141 297 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RPL37P4-201ENST00000448908 268 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.43□□□□□ -2.02
USP43Q70EL4 AC114982.1-201ENST00000469402 321 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RPL26P26-201ENST00000480251 434 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.43□□□□□ -2.02
USP43Q70EL4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.43□□□□□ -2.02
USP43Q70EL4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.43□□□□□ -2.02
USP43Q70EL4 SNORA43.2-201ENST00000516652 128 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 RNU1-104P-201ENST00000517280 175 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 PRELID2P1-201ENST00000552837 301 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AC090617.3-201ENST00000573670 475 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.43□□□□□ -2.02
USP43Q70EL4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.43□□□□□ -2.02
USP43Q70EL4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.43□□□□□ -2.02
USP43Q70EL4 FTX_3.1-201ENST00000610451 147 ntBASIC2.43□□□□□ -2.02
USP43Q70EL4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.43□□□□□ -2.02
USP43Q70EL4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.43□□□□□ -2.02
USP43Q70EL4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.43□□□□□ -2.02
USP43Q70EL4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.43□□□□□ -2.02
USP43Q70EL4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USP43Q70EL4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
USP43Q70EL4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP43Q70EL4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
USP43Q70EL4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
USP43Q70EL4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU6-1298P-201ENST00000362456 101 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU6-778P-201ENST00000363269 103 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU6-153P-201ENST00000364422 104 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 Y_RNA.261-201ENST00000364631 102 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 Y_RNA.400-201ENST00000383963 111 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU6-1035P-201ENST00000384477 107 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU6-658P-201ENST00000384606 106 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 U3.37-201ENST00000408528 213 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU6-257P-201ENST00000410238 98 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 OOSP1P1-201ENST00000423265 274 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.42□□□□□ -2.02
USP43Q70EL4 MTATP6P7-201ENST00000453315 681 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU7-87P-201ENST00000459343 62 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 AP001025.1-201ENST00000486139 332 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU7-175P-201ENST00000515915 61 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 SNORA27.4-201ENST00000516650 95 ntBASIC2.42□□□□□ -2.02
USP43Q70EL4 RNU6-1282P-201ENST00000516735 96 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms