Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AP003716.2-201ENST00000528260 108 ntBASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 AC073539.2-201ENST00000597113 165 ntBASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 AC024060.1-201ENST00000607052 494 ntBASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 PART1_2.1-201ENST00000612397 250 ntBASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 uc_338.34-201ENST00000617467 174 ntBASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 AL356596.1-201ENST00000624230 379 ntBASIC-0.18□□□□□ -2.44
CCDC171Q6TFL3 SNORA42.1-201ENST00000363515 137 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 Y_RNA.504-201ENST00000384481 104 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 SNORD111-201ENST00000408139 94 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AL663109.1-201ENST00000411498 844 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 CALM2P4-201ENST00000430810 426 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AC093019.1-201ENST00000443135 252 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 MTCO3P10-201ENST00000455912 772 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AC010469.2-201ENST00000496412 480 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AC008628.2-201ENST00000502605 298 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AC010486.2-201ENST00000505572 483 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 MIR4300-201ENST00000581016 96 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 MIR4290-201ENST00000583807 95 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 AL158042.1-201ENST00000605338 460 ntBASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.19□□□□□ -2.44
CCDC171Q6TFL3 RNU6-723P-201ENST00000383973 107 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 U8.16-201ENST00000391279 133 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 MIR1827-201ENST00000408549 66 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 RNU6-994P-201ENST00000410507 111 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 RNU6-57P-201ENST00000411348 103 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AC012306.1-201ENST00000423267 114 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AL606489.2-201ENST00000433886 234 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 TPT1P7-201ENST00000458300 517 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AC013828.2-201ENST00000532487 235 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AC122133.1-201ENST00000613964 233 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AC008250.2-201ENST00000615261 205 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AC015726.2-201ENST00000620112 122 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 AC068880.4-201ENST00000623082 495 ntBASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.2□□□□□ -2.44
CCDC171Q6TFL3 MIR18A-201ENST00000362310 71 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 SNORD114-5-201ENST00000362928 70 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 RNU6-302P-201ENST00000365249 107 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 RNU6V-201ENST00000384105 107 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 RNU6-298P-201ENST00000390888 96 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 MIR1185-1-201ENST00000408598 86 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC016909.1-201ENST00000415916 166 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 MTND3P17-201ENST00000416968 344 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AL354692.1-201ENST00000423044 315 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 RNU7-57P-201ENST00000459540 60 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC091874.1-201ENST00000511402 339 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC074133.1-201ENST00000515696 183 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 RNU6-863P-201ENST00000515989 104 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC109479.2-201ENST00000517842 174 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC009712.1-201ENST00000564938 316 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 AC008521.1-201ENST00000587471 187 ntBASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.21□□□□□ -2.44
CCDC171Q6TFL3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 MIR1-1-201ENST00000362147 71 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 RNU6-424P-201ENST00000384367 105 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 RNU6-679P-201ENST00000391003 106 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 ELOCP24-201ENST00000456370 334 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 RNU7-12P-201ENST00000516030 62 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 MIR3678-201ENST00000578455 94 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 SNORA28-201ENST00000606769 126 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 AC090517.2-201ENST00000614966 680 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 AL136221.1-201ENST00000621449 509 ntBASIC-0.22□□□□□ -2.44
CCDC171Q6TFL3 MTND4P12-201ENST00000498999 1377 ntBASIC-0.22□□□□□ -2.45
CCDC171Q6TFL3 SNORA25.3-201ENST00000363205 127 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 AC004386.2-201ENST00000441858 148 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 SNORD111.1-201ENST00000516421 86 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 AC025647.1-201ENST00000517879 253 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 AC141557.1-201ENST00000540982 400 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 MIR3118-1-201ENST00000581787 76 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 MIR5006-201ENST00000583027 110 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 AC005776.1-201ENST00000603164 290 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 AC104408.1-201ENST00000605241 170 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 AL359697.1-201ENST00000624879 587 ntBASIC-0.23□□□□□ -2.45
CCDC171Q6TFL3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
CCDC171Q6TFL3 SNORD56.2-201ENST00000363242 71 ntBASIC-0.24□□□□□ -2.45
CCDC171Q6TFL3 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.24□□□□□ -2.45
CCDC171Q6TFL3 RNA5SP517-201ENST00000364724 117 ntBASIC-0.24□□□□□ -2.45
CCDC171Q6TFL3 SNORA24.1-201ENST00000384401 135 ntBASIC-0.24□□□□□ -2.45
CCDC171Q6TFL3 MIR573-201ENST00000384964 99 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms