Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AC010620.2-201ENST00000600135 313 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AC011921.3-201ENST00000605540 361 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AC005520.5-201ENST00000613926 164 ntBASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF549Q6P9A3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RNU6-529P-201ENST00000363383 104 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.180-201ENST00000363867 113 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 Y_RNA.200-201ENST00000364018 102 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AL133475.1-201ENST00000404414 305 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 MIR1298-201ENST00000408783 112 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RNU2-49P-201ENST00000410666 184 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AC138623.1-201ENST00000418060 216 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AC019205.3-201ENST00000424573 156 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 PTGES3P4-201ENST00000426243 356 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AC007395.1-201ENST00000451333 677 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RNU7-23P-201ENST00000459465 62 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RPS29P12-201ENST00000460178 152 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 RNU6-182P-201ENST00000516970 105 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 CBX3P4-201ENST00000538909 354 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AL138963.2-201ENST00000605137 226 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AC002543.1-201ENST00000299783 1954 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 AC099654.7-201ENST00000635788 2127 ntBASIC2.47□□□□□ -2.01
ZNF549Q6P9A3 BX322639.1-202ENST00000423987 2213 ntBASIC2.46□□□□□ -2.01
ZNF549Q6P9A3 AL109809.4-201ENST00000603520 2185 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.29-201ENST00000362570 113 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.150-201ENST00000363562 102 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 RNU6-748P-201ENST00000384648 107 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 MIR518C-201ENST00000384822 101 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 MIR27B-201ENST00000385129 97 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 RPL19P1-201ENST00000411635 428 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AIMP1P2-201ENST00000425294 312 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AL365496.1-201ENST00000426885 215 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AL109933.2-201ENST00000452651 260 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 RPL23AP3-201ENST00000453844 468 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 RNA5SP54-201ENST00000516951 92 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 RNU2-31P-201ENST00000516954 155 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AC233702.2-202ENST00000562547 291 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 MZT1P2-201ENST00000604387 248 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AC010999.1-201ENST00000611856 324 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 MIR6852-201ENST00000621699 66 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AC010297.1-201ENST00000623948 149 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 SNORD98-201ENST00000636377 67 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AC004944.1-201ENST00000517807 3059 ntBASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
ZNF549Q6P9A3 AC069528.2-201ENST00000624849 1991 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AC135776.4-201ENST00000624300 1904 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RNU6-740P-201ENST00000364734 105 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 MIR1289-1-201ENST00000408836 144 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RNA5SP201-201ENST00000410316 124 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 ELOCP21-201ENST00000412558 336 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 snoU13.14-201ENST00000459372 104 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AC091179.3-201ENST00000474761 144 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AIG1P1-201ENST00000503376 148 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RNU7-110P-201ENST00000516891 62 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RNU6-56P-201ENST00000516986 93 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AP002001.1-203ENST00000534002 267 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 CYP4A27P-201ENST00000567218 190 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 MIR4282-201ENST00000583613 67 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RPS15AP11-201ENST00000594193 385 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 RNU6-91P-201ENST00000607774 107 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 AC010889.1-201ENST00000566193 2666 ntBASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
ZNF549Q6P9A3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
ZNF549Q6P9A3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.44□□□□□ -2.02
ZNF549Q6P9A3 ZNF204P-201ENST00000416749 2397 ntBASIC2.44□□□□□ -2.02
ZNF549Q6P9A3 UBE2WP1-201ENST00000362030 340 ntBASIC2.44□□□□□ -2.02
ZNF549Q6P9A3 MIR411-201ENST00000362239 96 ntBASIC2.44□□□□□ -2.02
ZNF549Q6P9A3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.44□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 260.9 ms