Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NIPAL3Q6P499 AC006504.8-201ENST00000621046 635 ntBASIC1.37□□□□□ -2.19
NIPAL3Q6P499 Y_RNA.38-201ENST00000362617 102 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 SNORD1A-201ENST00000364968 72 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 RNU6-245P-201ENST00000384020 107 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 RNU6-417P-201ENST00000384712 107 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 RNU6-331P-201ENST00000384724 107 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 MIR517A-201ENST00000385001 87 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 ZNF885P-201ENST00000420174 1098 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 AL590632.1-201ENST00000424289 371 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 AC079354.2-201ENST00000453523 154 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.36□□□□□ -2.19
NIPAL3Q6P499 AC093534.1-201ENST00000504977 132 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 AC079140.2-201ENST00000506193 142 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.36□□□□□ -2.19
NIPAL3Q6P499 RNU6-256P-201ENST00000516747 97 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 AL138726.1-201ENST00000614873 333 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 AC008873.1-201ENST00000625051 138 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 snoZ196.1-201ENST00000625269 89 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 AC095038.3-201ENST00000634439 195 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
NIPAL3Q6P499 SNORD33-201ENST00000362761 85 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 Y_RNA.100-201ENST00000363141 102 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 RNU4-24P-201ENST00000364565 139 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 RNA5SP323-201ENST00000391094 133 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 RNU6-332P-201ENST00000391193 108 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 MIR1323-201ENST00000408090 73 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 AC008134.1-201ENST00000420943 193 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 MTND3P21-201ENST00000433774 331 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.35□□□□□ -2.19
NIPAL3Q6P499 MTND1P11-201ENST00000456661 876 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 FO393415.2-201ENST00000480085 343 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 RNU6-902P-201ENST00000517212 91 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 AL353997.5-201ENST00000618886 171 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 AL121890.5-201ENST00000620848 304 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.35□□□□□ -2.19
NIPAL3Q6P499 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NIPAL3Q6P499 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
NIPAL3Q6P499 MIR302D-201ENST00000362275 68 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 RNU1-42P-201ENST00000364033 160 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 SNORD115-32-201ENST00000364079 82 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 RNU4-75P-201ENST00000364621 146 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 SNORA67.2-201ENST00000384300 149 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 RNA5SP213-201ENST00000391031 106 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.34□□□□□ -2.19
NIPAL3Q6P499 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.34□□□□□ -2.19
NIPAL3Q6P499 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.34□□□□□ -2.19
NIPAL3Q6P499 RNU7-66P-201ENST00000459469 62 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 MTND1P5-201ENST00000517906 940 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.34□□□□□ -2.19
NIPAL3Q6P499 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.34□□□□□ -2.19
NIPAL3Q6P499 MIR4709-201ENST00000577272 72 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 MIR4524B-201ENST00000581569 115 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 AC097065.2-201ENST00000608159 533 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 AC019193.3-201ENST00000609144 554 ntBASIC1.34□□□□□ -2.19
NIPAL3Q6P499 WWP1P1-201ENST00000466609 2769 ntBASIC1.34□□□□□ -2.2
NIPAL3Q6P499 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
NIPAL3Q6P499 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AL161722.3-201ENST00000605789 2983 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 SNORA33-201ENST00000363664 130 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 SNORD115-8-201ENST00000363856 82 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.287-201ENST00000364853 94 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 SNORD115-38-201ENST00000365037 82 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.414-201ENST00000384011 101 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 RNU6-203P-201ENST00000384038 104 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 RNU6-541P-201ENST00000384709 110 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 MIR153-2-201ENST00000385225 87 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
NIPAL3Q6P499 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NIPAL3Q6P499 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.33□□□□□ -2.2
NIPAL3Q6P499 Z82188.1-201ENST00000436709 154 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 SNORA25.14-201ENST00000516481 132 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 SNORA31.24-201ENST00000517232 57 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AC024995.1-201ENST00000523014 93 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AC109635.3-201ENST00000529536 185 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.33□□□□□ -2.2
NIPAL3Q6P499 7SK.7-201ENST00000603504 247 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AC124303.1-201ENST00000605703 360 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AF250324.2-201ENST00000608299 610 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 AC015540.1-201ENST00000615828 501 ntBASIC1.33□□□□□ -2.2
NIPAL3Q6P499 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NIPAL3Q6P499 MTND5P35-201ENST00000557537 1720 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.41-201ENST00000362646 102 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 RNA5SP99-201ENST00000364020 114 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 RNU6-1090P-201ENST00000364065 94 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 Y_RNA.319-201ENST00000365138 92 ntBASIC1.32□□□□□ -2.2
NIPAL3Q6P499 SNORA4.2-201ENST00000365313 147 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms