Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 MIR378D2-201ENST00000580636 98 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AL451064.1-201ENST00000607718 471 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AL451054.2-201ENST00000420896 202 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 snoU13.14-201ENST00000459372 104 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AC093012.1-202ENST00000549403 582 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AL359999.1-201ENST00000604513 294 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 ART2BP-201ENST00000453501 499 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AC079382.1-201ENST00000493346 557 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
VPS13DQ5THJ4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AC093850.1-201ENST00000454121 251 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AP001429.1-201ENST00000602568 530 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 SNORD114-6-201ENST00000364393 72 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AL354692.1-201ENST00000423044 315 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 POLR2KP2-201ENST00000438155 177 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AC093019.1-201ENST00000443135 252 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 MTND1P31-201ENST00000449206 961 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 HSPE1P23-201ENST00000509838 286 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AC008494.2-201ENST00000514544 370 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 RNU6-778P-201ENST00000363269 103 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 RNU6-921P-201ENST00000384361 107 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 RNU4-30P-201ENST00000410245 143 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 CR383656.4-201ENST00000546909 122 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.63□□□□□ -2.51
VPS13DQ5THJ4 RNU4-56P-201ENST00000364700 142 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 MIR301A-201ENST00000385261 86 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNY4P36-201ENST00000391116 96 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNU6-948P-201ENST00000516374 107 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 MTCO3P15-201ENST00000526563 574 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AL158050.2-201ENST00000605336 568 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNU6-212P-201ENST00000362642 104 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 MIR653-201ENST00000385279 96 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 U8.15-201ENST00000390947 134 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNU6-796P-201ENST00000391086 107 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AL163973.1-201ENST00000484753 577 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 MTCO3P28-201ENST00000513351 515 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNA5SP470-201ENST00000516463 106 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 SNORA18.7-201ENST00000516910 131 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 FRG1KP-201ENST00000623592 341 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AP003400.6-201ENST00000624698 740 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AC019226.1-201ENST00000625666 515 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 MTND1P37-201ENST00000636562 264 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RPL37P6-201ENST00000460682 294 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNU6-504P-201ENST00000516568 104 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AC010133.1-201ENST00000615809 842 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AP000676.3-201ENST00000623299 569 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AC112204.3-201ENST00000623822 332 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 AL139824.2-201ENST00000458731 1095 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 MIR5706-201ENST00000579841 80 ntBASIC-0.64□□□□□ -2.51
VPS13DQ5THJ4 RNU6-490P-201ENST00000362985 107 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 USP9YP21-201ENST00000420603 432 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC007919.1-201ENST00000429380 217 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 MTND1P4-201ENST00000435196 415 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 MTCYBP39-201ENST00000437562 491 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC092170.1-201ENST00000440211 356 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC010468.3-201ENST00000508225 458 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC010525.2-201ENST00000590920 195 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 SNORD115-2-201ENST00000362842 82 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AL663109.1-201ENST00000411498 844 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC010385.1-201ENST00000412374 256 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC015818.7-201ENST00000428754 109 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC087499.7-201ENST00000441958 109 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AL050341.1-201ENST00000447743 313 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 BNIP3P24-201ENST00000593398 557 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 AC090186.1-201ENST00000605991 572 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 MIR6129-201ENST00000616087 109 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 RNY4P27-201ENST00000363341 96 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 LARP1BP3-201ENST00000437229 869 ntBASIC-0.65□□□□□ -2.51
VPS13DQ5THJ4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms