Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MRPL42P3-201ENST00000401492 326 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 BX510359.4-201ENST00000423750 193 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 AC107083.1-201ENST00000439643 279 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 RNU6-948P-201ENST00000516374 107 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 RNU6-1012P-201ENST00000516606 109 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 SNORA31.25-201ENST00000517242 134 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 CYCSP23-201ENST00000519781 313 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 AC016925.2-201ENST00000605108 242 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 AC013412.1-201ENST00000610687 192 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 AC011476.5-201ENST00000615594 130 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 AL590240.4-201ENST00000616908 390 ntBASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ATPAF1Q5TC12 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 SNORD14.1-201ENST00000365609 90 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 DEFA7P-201ENST00000382676 285 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 SNORA51.11-201ENST00000384442 131 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 RNU6-160P-201ENST00000384591 107 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 MIR518A2-201ENST00000384966 87 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 MIR29C-201ENST00000385231 88 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 AL135938.1-201ENST00000443141 297 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 AP003072.1-201ENST00000531740 145 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 AC018448.1-201ENST00000552843 316 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 RPS29P30-201ENST00000600975 111 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 AC104695.3-201ENST00000604052 296 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 AC130454.1-201ENST00000622948 401 ntBASIC2.34□□□□□ -2.03
ATPAF1Q5TC12 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
ATPAF1Q5TC12 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
ATPAF1Q5TC12 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.34□□□□□ -2.04
ATPAF1Q5TC12 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 RNA5SP493-201ENST00000364115 91 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 Y_RNA.498-201ENST00000384460 102 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 SNORD78.2-201ENST00000391076 69 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 AL356057.3-201ENST00000402607 340 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 RNU6-57P-201ENST00000411348 103 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 AC074290.1-201ENST00000448883 135 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 AC074133.1-201ENST00000515696 183 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 RNU6-408P-201ENST00000515910 100 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 AC040926.1-201ENST00000530195 238 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 MYL12BP1-201ENST00000569826 507 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 MIR4659A-201ENST00000580269 81 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 ZNF861P-201ENST00000588126 639 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 ELOCP29-201ENST00000588193 334 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 AC040896.1-201ENST00000613819 479 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.33□□□□□ -2.04
ATPAF1Q5TC12 RNU6-961P-201ENST00000363893 105 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 SNORA33.2-201ENST00000365413 134 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 Y_RNA.424-201ENST00000384063 103 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 MIR9-1-201ENST00000385198 89 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 Z92545.1-201ENST00000411782 234 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AC087499.2-201ENST00000432861 149 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AL357134.1-201ENST00000445848 426 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 FCF1P4-201ENST00000448326 183 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 NDUFB4P10-201ENST00000452541 359 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 RNU6-625P-201ENST00000459412 107 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 RNA5SP82-201ENST00000516707 92 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AP005660.1-201ENST00000522972 293 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AC240442.1-201ENST00000616055 283 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 snoZ196.1-201ENST00000625269 89 ntBASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATPAF1Q5TC12 AC245060.5-201ENST00000610778 3293 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 RNU6-450P-201ENST00000364654 107 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 RNU6-1235P-201ENST00000384559 107 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 AL138827.1-201ENST00000402666 306 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 MIR1283-2-201ENST00000408621 87 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 MIR1185-2-201ENST00000408687 86 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 RNA5SP21-201ENST00000410917 96 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 RNU6-498P-201ENST00000459468 107 ntBASIC2.31□□□□□ -2.04
ATPAF1Q5TC12 AC055731.1-201ENST00000474387 401 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms