Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-1314P-201ENST00000517139 104 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 MTND1P5-201ENST00000517906 940 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.36□□□□□ -2.19
RAB40BQ12829 MIR3942-201ENST00000585264 109 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.36□□□□□ -2.19
RAB40BQ12829 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 MIR338-201ENST00000636369 67 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 AC100810.6-201ENST00000638068 285 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.36□□□□□ -2.19
RAB40BQ12829 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
RAB40BQ12829 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
RAB40BQ12829 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
RAB40BQ12829 snoU2-30.2-201ENST00000362805 70 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 SNORD115-32-201ENST00000364079 82 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 RNU4-40P-201ENST00000364351 143 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 SNORA63D-201ENST00000364359 132 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 RNU6-306P-201ENST00000384617 107 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 RNU6-57P-201ENST00000411348 103 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.35□□□□□ -2.19
RAB40BQ12829 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.35□□□□□ -2.19
RAB40BQ12829 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.35□□□□□ -2.19
RAB40BQ12829 RNU7-57P-201ENST00000459540 60 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 RPL26P26-201ENST00000480251 434 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 AC108210.2-201ENST00000503681 201 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.35□□□□□ -2.19
RAB40BQ12829 SNORA25.15-201ENST00000516487 89 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.35□□□□□ -2.19
RAB40BQ12829 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.35□□□□□ -2.19
RAB40BQ12829 AC015712.3-201ENST00000559380 164 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.35□□□□□ -2.19
RAB40BQ12829 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 U4.5-201ENST00000617137 123 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 AC008873.1-201ENST00000625051 138 ntBASIC1.35□□□□□ -2.19
RAB40BQ12829 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.35□□□□□ -2.19
RAB40BQ12829 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RAB40BQ12829 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.34□□□□□ -2.19
RAB40BQ12829 SNORD115-8-201ENST00000363856 82 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 RNU6-534P-201ENST00000364877 106 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 Y_RNA.295-201ENST00000364918 102 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 SNORD115-38-201ENST00000365037 82 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 Y_RNA.319-201ENST00000365138 92 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 RNU6-245P-201ENST00000384020 107 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 Y_RNA.516-201ENST00000384541 124 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 MIR153-2-201ENST00000385225 87 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 MIR548B-201ENST00000385247 97 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 RNU6-360P-201ENST00000390944 104 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.34□□□□□ -2.19
RAB40BQ12829 FTH1P12-201ENST00000432137 551 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 HMGN2P34-201ENST00000437647 269 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 JTBP1-201ENST00000441314 247 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.34□□□□□ -2.19
RAB40BQ12829 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.34□□□□□ -2.19
RAB40BQ12829 RNU6-1146P-201ENST00000516282 102 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 RNA5SP481-201ENST00000516814 122 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 RNU6-1198P-201ENST00000516904 67 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.34□□□□□ -2.19
RAB40BQ12829 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.34□□□□□ -2.19
RAB40BQ12829 MIR3683-201ENST00000580847 82 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 MIR4524B-201ENST00000581569 115 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 SNORD11B-201ENST00000607707 90 ntBASIC1.34□□□□□ -2.19
RAB40BQ12829 AC100821.1-201ENST00000523153 2479 ntBASIC1.34□□□□□ -2.2
RAB40BQ12829 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RAB40BQ12829 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
RAB40BQ12829 Y_RNA.67-201ENST00000362870 100 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 Y_RNA.157-201ENST00000363638 102 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 SNORA72.2-201ENST00000365028 127 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 SNORA67.2-201ENST00000384300 149 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 SNORD116-4-201ENST00000384733 96 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 MIR517C-201ENST00000385103 95 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 MIR1253-201ENST00000408273 105 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 RNA5SP118-201ENST00000410385 109 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.33□□□□□ -2.2
RAB40BQ12829 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.33□□□□□ -2.2
RAB40BQ12829 MTATP6P13-201ENST00000438531 667 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.33□□□□□ -2.2
RAB40BQ12829 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.33□□□□□ -2.2
RAB40BQ12829 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.33□□□□□ -2.2
RAB40BQ12829 RNU6-864P-201ENST00000516256 108 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 RNU6-58P-201ENST00000517143 103 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.33□□□□□ -2.2
RAB40BQ12829 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.33□□□□□ -2.2
RAB40BQ12829 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.33□□□□□ -2.2
RAB40BQ12829 AP003465.2-201ENST00000602571 373 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 7SK.7-201ENST00000603504 247 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 AL359757.2-201ENST00000624309 274 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.33□□□□□ -2.2
RAB40BQ12829 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.33□□□□□ -2.2
RAB40BQ12829 MIR3662-201ENST00000637030 95 ntBASIC1.33□□□□□ -2.2
RAB40BQ12829 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
RAB40BQ12829 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.32□□□□□ -2.2
RAB40BQ12829 RNU6-1013P-201ENST00000384180 107 ntBASIC1.32□□□□□ -2.2
RAB40BQ12829 Y_RNA.453-201ENST00000384223 109 ntBASIC1.32□□□□□ -2.2
RAB40BQ12829 RNU6-1215P-201ENST00000384441 102 ntBASIC1.32□□□□□ -2.2
RAB40BQ12829 RNU6-541P-201ENST00000384709 110 ntBASIC1.32□□□□□ -2.2
RAB40BQ12829 RNU6-417P-201ENST00000384712 107 ntBASIC1.32□□□□□ -2.2
RAB40BQ12829 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.32□□□□□ -2.2
RAB40BQ12829 CYCSP49-201ENST00000420810 319 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms