Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SNORD116-14-201ENST00000383894 92 ntBASIC3.28□□□□□ -1.88
YBX1P67809 RNU6-969P-201ENST00000383900 105 ntBASIC3.28□□□□□ -1.88
YBX1P67809 SNORD116-17-201ENST00000383929 92 ntBASIC3.28□□□□□ -1.88
YBX1P67809 SNORD116-15-201ENST00000384445 92 ntBASIC3.28□□□□□ -1.88
YBX1P67809 Y_RNA.542-201ENST00000384641 111 ntBASIC3.28□□□□□ -1.88
YBX1P67809 SNORD116-19-201ENST00000384729 92 ntBASIC3.28□□□□□ -1.88
YBX1P67809 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
YBX1P67809 AL121914.1-201ENST00000450188 156 ntBASIC3.28□□□□□ -1.88
YBX1P67809 AC245047.8-201ENST00000456455 284 ntBASIC3.28□□□□□ -1.88
YBX1P67809 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.28□□□□□ -1.88
YBX1P67809 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.28□□□□□ -1.88
YBX1P67809 SCARNA8-201ENST00000515924 131 ntBASIC3.28□□□□□ -1.88
YBX1P67809 RNU6-344P-201ENST00000516635 111 ntBASIC3.28□□□□□ -1.88
YBX1P67809 RNU6-453P-201ENST00000516819 85 ntBASIC3.28□□□□□ -1.88
YBX1P67809 RPS15AP11-201ENST00000594193 385 ntBASIC3.28□□□□□ -1.88
YBX1P67809 AL391813.1-201ENST00000603098 260 ntBASIC3.28□□□□□ -1.88
YBX1P67809 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
YBX1P67809 XIST_intron.1-201ENST00000619444 68 ntBASIC3.28□□□□□ -1.88
YBX1P67809 MIR6852-201ENST00000621699 66 ntBASIC3.28□□□□□ -1.88
YBX1P67809 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
YBX1P67809 Y_RNA.40-201ENST00000362645 93 ntBASIC3.27□□□□□ -1.89
YBX1P67809 U3.9-201ENST00000363823 204 ntBASIC3.27□□□□□ -1.89
YBX1P67809 Y_RNA.341-201ENST00000365341 102 ntBASIC3.27□□□□□ -1.89
YBX1P67809 Y_RNA.420-201ENST00000384043 110 ntBASIC3.27□□□□□ -1.89
YBX1P67809 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
YBX1P67809 RNA5SP201-201ENST00000410316 124 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.27□□□□□ -1.89
YBX1P67809 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.27□□□□□ -1.89
YBX1P67809 AL441985.1-201ENST00000457727 251 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC093663.1-201ENST00000497190 394 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
YBX1P67809 RNU6-919P-201ENST00000516731 104 ntBASIC3.27□□□□□ -1.89
YBX1P67809 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.27□□□□□ -1.89
YBX1P67809 AC112693.2-201ENST00000556538 232 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC025281.1-201ENST00000567026 265 ntBASIC3.27□□□□□ -1.89
YBX1P67809 MIR4644-201ENST00000579929 84 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.27□□□□□ -1.89
YBX1P67809 AC091152.3-201ENST00000604227 325 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC093908.1-201ENST00000623125 8092 ntBASIC3.27□□□□□ -1.89
YBX1P67809 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.27□□□□□ -1.89
YBX1P67809 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
YBX1P67809 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.26□□□□□ -1.89
YBX1P67809 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
YBX1P67809 Y_RNA.243-201ENST00000364481 109 ntBASIC3.26□□□□□ -1.89
YBX1P67809 RNU6-748P-201ENST00000384648 107 ntBASIC3.26□□□□□ -1.89
YBX1P67809 MIR616-201ENST00000385293 97 ntBASIC3.26□□□□□ -1.89
YBX1P67809 SNORA48.2-201ENST00000390926 124 ntBASIC3.26□□□□□ -1.89
YBX1P67809 AL355497.1-201ENST00000406262 551 ntBASIC3.26□□□□□ -1.89
YBX1P67809 AC023141.4-201ENST00000412031 328 ntBASIC3.26□□□□□ -1.89
YBX1P67809 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.26□□□□□ -1.89
YBX1P67809 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
YBX1P67809 AP001486.1-201ENST00000463339 476 ntBASIC3.26□□□□□ -1.89
YBX1P67809 RPL21P10-201ENST00000463521 490 ntBASIC3.26□□□□□ -1.89
YBX1P67809 RN7SL807P-201ENST00000470923 297 ntBASIC3.26□□□□□ -1.89
YBX1P67809 Y_RNA.686-201ENST00000516548 134 ntBASIC3.26□□□□□ -1.89
YBX1P67809 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
YBX1P67809 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.26□□□□□ -1.89
YBX1P67809 U6.98-201ENST00000637157 84 ntBASIC3.26□□□□□ -1.89
YBX1P67809 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
YBX1P67809 AL356274.2-201ENST00000624379 3752 ntBASIC3.26□□□□□ -1.89
YBX1P67809 RNU1-75P-201ENST00000347264 129 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU4-15P-201ENST00000362613 141 ntBASIC3.25□□□□□ -1.89
YBX1P67809 SNORD114-19-201ENST00000363072 75 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU6-1205P-201ENST00000363625 106 ntBASIC3.25□□□□□ -1.89
YBX1P67809 Y_RNA.172-201ENST00000363765 102 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU1-33P-201ENST00000364249 162 ntBASIC3.25□□□□□ -1.89
YBX1P67809 Y_RNA.368-201ENST00000365547 113 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU6-80P-201ENST00000384195 107 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNA5SP504-201ENST00000410676 117 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNA5SP38-201ENST00000410750 119 ntBASIC3.25□□□□□ -1.89
YBX1P67809 TOMM22P2-201ENST00000430735 237 ntBASIC3.25□□□□□ -1.89
YBX1P67809 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.25□□□□□ -1.89
YBX1P67809 BX510359.1-201ENST00000456973 237 ntBASIC3.25□□□□□ -1.89
YBX1P67809 AP002884.2-201ENST00000471647 395 ntBASIC3.25□□□□□ -1.89
YBX1P67809 UBE2DNL-203ENST00000474922 222 ntBASIC3.25□□□□□ -1.89
YBX1P67809 AC145146.1-201ENST00000496370 254 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU1-143P-201ENST00000516296 146 ntBASIC3.25□□□□□ -1.89
YBX1P67809 SNORA70.19-201ENST00000516717 90 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU2-44P-201ENST00000516795 194 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU6-711P-201ENST00000517255 106 ntBASIC3.25□□□□□ -1.89
YBX1P67809 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.25□□□□□ -1.89
YBX1P67809 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.25□□□□□ -1.89
YBX1P67809 HSPE1P7-201ENST00000604681 321 ntBASIC3.25□□□□□ -1.89
YBX1P67809 U1.23-201ENST00000610293 146 ntBASIC3.25□□□□□ -1.89
YBX1P67809 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
YBX1P67809 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.25□□□□□ -1.89
YBX1P67809 TUG1_4.1-201ENST00000619464 181 ntBASIC3.25□□□□□ -1.89
YBX1P67809 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
YBX1P67809 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
YBX1P67809 AC110774.1-201ENST00000623567 2018 ntBASIC3.25□□□□□ -1.89
YBX1P67809 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
YBX1P67809 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.24□□□□□ -1.89
YBX1P67809 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
YBX1P67809 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
YBX1P67809 RNU6-1010P-201ENST00000362757 107 ntBASIC3.24□□□□□ -1.89
YBX1P67809 RNU6-1325P-201ENST00000364905 105 ntBASIC3.24□□□□□ -1.89
YBX1P67809 MIR147B-201ENST00000390185 80 ntBASIC3.24□□□□□ -1.89
YBX1P67809 AL365496.1-201ENST00000426885 215 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms