Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC107222.1-201ENST00000510899 637 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 Y_RNA.673-201ENST00000516306 88 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 RNU6-1198P-201ENST00000516904 67 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 SCARNA24.2-201ENST00000516968 130 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 RNA5SP402-201ENST00000517148 110 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 HSPE1P18-201ENST00000517602 280 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 DEFB108E-201ENST00000524692 240 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.32□□□□□ -2.04
SEC61A1P61619 AC105245.1-201ENST00000581934 244 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 AC005357.1-201ENST00000588399 301 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 AC006023.1-201ENST00000603944 259 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 AC010900.2-201ENST00000604508 210 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 AC010999.1-201ENST00000611856 324 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 PCGEM1.1-201ENST00000613431 131 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.32□□□□□ -2.04
SEC61A1P61619 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.32□□□□□ -2.04
SEC61A1P61619 AC135776.4-201ENST00000624300 1904 ntBASIC2.32□□□□□ -2.04
SEC61A1P61619 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
SEC61A1P61619 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
SEC61A1P61619 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.31□□□□□ -2.04
SEC61A1P61619 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.31□□□□□ -2.04
SEC61A1P61619 AC062016.1-201ENST00000355719 319 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 RNU6-280P-201ENST00000364145 104 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 Y_RNA.286-201ENST00000364813 102 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 MIR627-201ENST00000384979 97 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 RNU6-907P-201ENST00000390924 102 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 AC027124.2-201ENST00000428249 105 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 RPL26P26-201ENST00000480251 434 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 SRIP1-201ENST00000489235 288 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.31□□□□□ -2.04
SEC61A1P61619 SNORA40.9-201ENST00000515895 93 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 RNA5SP54-201ENST00000516951 92 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 AC026241.1-201ENST00000517873 2142 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
SEC61A1P61619 RPL30P11-203ENST00000598995 310 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 SDR42E1P4-201ENST00000620894 481 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.31□□□□□ -2.04
SEC61A1P61619 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SEC61A1P61619 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SEC61A1P61619 MTND5P35-201ENST00000557537 1720 ntBASIC2.31□□□□□ -2.04
SEC61A1P61619 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
SEC61A1P61619 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
SEC61A1P61619 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SEC61A1P61619 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SEC61A1P61619 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SEC61A1P61619 RNU6-626P-201ENST00000363354 107 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 RNU6-137P-201ENST00000363680 108 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 Y_RNA.179-201ENST00000363844 90 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 RNU6-1180P-201ENST00000364935 107 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 RNU6-20P-201ENST00000384106 107 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 SNORA46.1-201ENST00000391069 153 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AL138827.1-201ENST00000402666 306 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 MRPL35P1-201ENST00000404272 572 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 RNA5SP201-201ENST00000410316 124 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AC004866.1-201ENST00000411748 78 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AC096920.1-201ENST00000423991 241 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 MICF-203ENST00000432679 129 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.3□□□□□ -2.04
SEC61A1P61619 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.3□□□□□ -2.04
SEC61A1P61619 MTND4LP30-201ENST00000454092 297 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 SNORD109B-201ENST00000458961 67 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 SNORD109A-201ENST00000459128 67 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AC007215.1-201ENST00000464893 276 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AC091179.3-201ENST00000474761 144 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 DEFB131C-201ENST00000528817 165 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.3□□□□□ -2.04
SEC61A1P61619 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.3□□□□□ -2.04
SEC61A1P61619 AC055872.1-201ENST00000570978 278 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 MIR3668-201ENST00000582138 75 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 MIR4672-201ENST00000583126 81 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AL713866.2-201ENST00000603579 219 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AL356280.1-201ENST00000603614 379 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AL049779.4-201ENST00000604500 156 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AC090517.3-201ENST00000625170 141 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 U6.104-201ENST00000637979 90 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 AC010329.5-201ENST00000623497 2174 ntBASIC2.3□□□□□ -2.04
SEC61A1P61619 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.3□□□□□ -2.04
SEC61A1P61619 BX322639.1-202ENST00000423987 2213 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SEC61A1P61619 SNORD27-201ENST00000363981 72 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 SNORA18.2-201ENST00000383865 132 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 Y_RNA.489-201ENST00000384410 101 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 Y_RNA.500-201ENST00000384466 111 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SEC61A1P61619 FO393413.1-201ENST00000402892 195 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 Y_RNA.595-201ENST00000410403 105 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.29□□□□□ -2.04
SEC61A1P61619 RPL23AP3-201ENST00000453844 468 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 RPS3P1-201ENST00000456781 192 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 RPL39P38-201ENST00000467018 153 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 HMGB3P17-201ENST00000504195 649 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 Y_RNA.683-201ENST00000516508 93 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 RNU7-110P-201ENST00000516891 62 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.29□□□□□ -2.04
SEC61A1P61619 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.29□□□□□ -2.04
SEC61A1P61619 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.29□□□□□ -2.04
SEC61A1P61619 RPL12P50-201ENST00000603116 116 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.29□□□□□ -2.04
SEC61A1P61619 AL137847.3-201ENST00000611521 109 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms