Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC245884.10-201ENST00000597355 337 ntBASIC0.59□□□□□ -2.31
ACTBP60709 AC146944.4-201ENST00000602697 718 ntBASIC0.59□□□□□ -2.31
ACTBP60709 Z84480.1-201ENST00000605131 311 ntBASIC0.59□□□□□ -2.31
ACTBP60709 GHRLOS.1-201ENST00000610995 70 ntBASIC0.59□□□□□ -2.31
ACTBP60709 MIR8054-201ENST00000620877 86 ntBASIC0.59□□□□□ -2.31
ACTBP60709 AC009161.2-201ENST00000624626 138 ntBASIC0.59□□□□□ -2.31
ACTBP60709 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
ACTBP60709 Y_RNA.124-201ENST00000363339 93 ntBASIC0.58□□□□□ -2.32
ACTBP60709 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
ACTBP60709 RNU6-297P-201ENST00000384636 107 ntBASIC0.58□□□□□ -2.32
ACTBP60709 SNORD41-201ENST00000386967 70 ntBASIC0.58□□□□□ -2.32
ACTBP60709 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
ACTBP60709 RPS3AP1-201ENST00000413190 320 ntBASIC0.58□□□□□ -2.32
ACTBP60709 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.58□□□□□ -2.32
ACTBP60709 AC074290.1-201ENST00000448883 135 ntBASIC0.58□□□□□ -2.32
ACTBP60709 RNU7-138P-201ENST00000459479 64 ntBASIC0.58□□□□□ -2.32
ACTBP60709 SNORD42A-201ENST00000459584 64 ntBASIC0.58□□□□□ -2.32
ACTBP60709 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.58□□□□□ -2.32
ACTBP60709 AC105758.1-201ENST00000506038 399 ntBASIC0.58□□□□□ -2.32
ACTBP60709 RPL39P5-202ENST00000512505 151 ntBASIC0.58□□□□□ -2.32
ACTBP60709 RNU6-322P-201ENST00000516010 103 ntBASIC0.58□□□□□ -2.32
ACTBP60709 RNU7-128P-201ENST00000517247 62 ntBASIC0.58□□□□□ -2.32
ACTBP60709 AC025647.1-201ENST00000517879 253 ntBASIC0.58□□□□□ -2.32
ACTBP60709 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.58□□□□□ -2.32
ACTBP60709 AC016957.1-201ENST00000534895 309 ntBASIC0.58□□□□□ -2.32
ACTBP60709 AL121579.1-201ENST00000555129 305 ntBASIC0.58□□□□□ -2.32
ACTBP60709 AC022432.1-201ENST00000595739 310 ntBASIC0.58□□□□□ -2.32
ACTBP60709 MIR7111-201ENST00000619751 72 ntBASIC0.58□□□□□ -2.32
ACTBP60709 MIR6515-201ENST00000619843 57 ntBASIC0.58□□□□□ -2.32
ACTBP60709 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
ACTBP60709 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
ACTBP60709 MTND4P5-201ENST00000435821 1374 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU6-1286P-201ENST00000383871 107 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU6-969P-201ENST00000383900 105 ntBASIC0.57□□□□□ -2.32
ACTBP60709 SNORA40.3-201ENST00000390964 122 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNA5SP323-201ENST00000391094 133 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU6-903P-201ENST00000391270 109 ntBASIC0.57□□□□□ -2.32
ACTBP60709 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AF228730.1-201ENST00000397972 663 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AL031577.2-201ENST00000404133 280 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU6-248P-201ENST00000410720 107 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU6-57P-201ENST00000411348 103 ntBASIC0.57□□□□□ -2.32
ACTBP60709 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.57□□□□□ -2.32
ACTBP60709 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.57□□□□□ -2.32
ACTBP60709 AC133104.1-201ENST00000429100 218 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.57□□□□□ -2.32
ACTBP60709 AL356010.1-201ENST00000456364 102 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU7-57P-201ENST00000459540 60 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU6-221P-201ENST00000459541 99 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RPS26P48-201ENST00000491713 339 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.57□□□□□ -2.32
ACTBP60709 RNU1-142P-201ENST00000516682 145 ntBASIC0.57□□□□□ -2.32
ACTBP60709 RNU6-922P-201ENST00000516753 99 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AP002963.1-201ENST00000530590 184 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AC133485.1-201ENST00000567176 124 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AC138907.6-201ENST00000568401 126 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AC004584.2-201ENST00000570407 410 ntBASIC0.57□□□□□ -2.32
ACTBP60709 MIR5583-1-201ENST00000580941 59 ntBASIC0.57□□□□□ -2.32
ACTBP60709 U2.17-201ENST00000611454 95 ntBASIC0.57□□□□□ -2.32
ACTBP60709 AL359075.3-201ENST00000613288 217 ntBASIC0.57□□□□□ -2.32
ACTBP60709 snoZ196.1-201ENST00000625269 89 ntBASIC0.57□□□□□ -2.32
ACTBP60709 MIR660-201ENST00000385235 97 ntBASIC0.56□□□□□ -2.32
ACTBP60709 SNORD73A-201ENST00000386062 65 ntBASIC0.56□□□□□ -2.32
ACTBP60709 MIR1253-201ENST00000408273 105 ntBASIC0.56□□□□□ -2.32
ACTBP60709 AC008134.1-201ENST00000420943 193 ntBASIC0.56□□□□□ -2.32
ACTBP60709 CYCSP46-201ENST00000423569 204 ntBASIC0.56□□□□□ -2.32
ACTBP60709 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.56□□□□□ -2.32
ACTBP60709 CETN4P-201ENST00000432407 469 ntBASIC0.56□□□□□ -2.32
ACTBP60709 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.56□□□□□ -2.32
ACTBP60709 MTND2P39-201ENST00000457230 764 ntBASIC0.56□□□□□ -2.32
ACTBP60709 AC117454.1-201ENST00000491120 168 ntBASIC0.56□□□□□ -2.32
ACTBP60709 MTND1P22-201ENST00000510572 951 ntBASIC0.56□□□□□ -2.32
ACTBP60709 AC025465.4-201ENST00000513422 638 ntBASIC0.56□□□□□ -2.32
ACTBP60709 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.56□□□□□ -2.32
ACTBP60709 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.56□□□□□ -2.32
ACTBP60709 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.56□□□□□ -2.32
ACTBP60709 MIR5000-201ENST00000577717 103 ntBASIC0.56□□□□□ -2.32
ACTBP60709 AP000907.4-201ENST00000604143 237 ntBASIC0.56□□□□□ -2.32
ACTBP60709 SNORD3E-202ENST00000627253 216 ntBASIC0.56□□□□□ -2.32
ACTBP60709 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.56□□□□□ -2.32
ACTBP60709 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
ACTBP60709 RNU6-181P-201ENST00000363225 107 ntBASIC0.55□□□□□ -2.32
ACTBP60709 RNY1-201ENST00000364228 113 ntBASIC0.55□□□□□ -2.32
ACTBP60709 RNU6-1305P-201ENST00000364353 104 ntBASIC0.55□□□□□ -2.32
ACTBP60709 RNU6-456P-201ENST00000384493 107 ntBASIC0.55□□□□□ -2.32
ACTBP60709 MIR489-201ENST00000384923 84 ntBASIC0.55□□□□□ -2.32
ACTBP60709 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
ACTBP60709 RNU6-440P-201ENST00000390882 105 ntBASIC0.55□□□□□ -2.32
ACTBP60709 RNA5SP494-201ENST00000410653 129 ntBASIC0.55□□□□□ -2.32
ACTBP60709 MTCO3P18-201ENST00000440206 761 ntBASIC0.55□□□□□ -2.32
ACTBP60709 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.55□□□□□ -2.32
ACTBP60709 RNU7-180P-201ENST00000459240 63 ntBASIC0.55□□□□□ -2.32
ACTBP60709 RNU6-1037P-201ENST00000459571 107 ntBASIC0.55□□□□□ -2.32
ACTBP60709 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.55□□□□□ -2.32
ACTBP60709 HMGB1P29-201ENST00000505659 499 ntBASIC0.55□□□□□ -2.32
ACTBP60709 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.55□□□□□ -2.32
ACTBP60709 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
ACTBP60709 RNU6-344P-201ENST00000516635 111 ntBASIC0.55□□□□□ -2.32
ACTBP60709 RNU6-445P-201ENST00000516949 107 ntBASIC0.55□□□□□ -2.32
ACTBP60709 AC025449.1-201ENST00000603896 529 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms