Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL121579.1-201ENST00000555129 305 ntBASIC1.78□□□□□ -2.12
PEX3P56589 AC026470.2-201ENST00000561492 181 ntBASIC1.78□□□□□ -2.12
PEX3P56589 AC005668.1-201ENST00000571142 476 ntBASIC1.78□□□□□ -2.12
PEX3P56589 AC009229.3-201ENST00000608056 282 ntBASIC1.78□□□□□ -2.12
PEX3P56589 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
PEX3P56589 AC005562.2-201ENST00000618264 111 ntBASIC1.78□□□□□ -2.12
PEX3P56589 AC137590.2-201ENST00000619709 240 ntBASIC1.78□□□□□ -2.12
PEX3P56589 AC092794.2-201ENST00000620933 563 ntBASIC1.78□□□□□ -2.12
PEX3P56589 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
PEX3P56589 RNU6-743P-201ENST00000364151 106 ntBASIC1.77□□□□□ -2.13
PEX3P56589 SNORD31B-201ENST00000364977 69 ntBASIC1.77□□□□□ -2.13
PEX3P56589 MIR29C-201ENST00000385231 88 ntBASIC1.77□□□□□ -2.13
PEX3P56589 MIR549A-201ENST00000385268 96 ntBASIC1.77□□□□□ -2.13
PEX3P56589 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PEX3P56589 snoU13.30-201ENST00000458951 104 ntBASIC1.77□□□□□ -2.13
PEX3P56589 FGF7P4-201ENST00000509595 295 ntBASIC1.77□□□□□ -2.13
PEX3P56589 RNA5SP384-201ENST00000516615 116 ntBASIC1.77□□□□□ -2.13
PEX3P56589 Y_RNA.708-201ENST00000516950 96 ntBASIC1.77□□□□□ -2.13
PEX3P56589 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.77□□□□□ -2.13
PEX3P56589 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.77□□□□□ -2.13
PEX3P56589 AC005730.3-201ENST00000583067 366 ntBASIC1.77□□□□□ -2.13
PEX3P56589 AC007229.1-201ENST00000590455 412 ntBASIC1.77□□□□□ -2.13
PEX3P56589 AC016727.1-205ENST00000605437 569 ntBASIC1.77□□□□□ -2.13
PEX3P56589 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
PEX3P56589 AC099654.5-201ENST00000636479 350 ntBASIC1.77□□□□□ -2.13
PEX3P56589 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PEX3P56589 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PEX3P56589 RNU6-137P-201ENST00000363680 108 ntBASIC1.76□□□□□ -2.13
PEX3P56589 SNORA67.2-201ENST00000384300 149 ntBASIC1.76□□□□□ -2.13
PEX3P56589 SNORA40.19-201ENST00000390846 128 ntBASIC1.76□□□□□ -2.13
PEX3P56589 AC123900.1-201ENST00000420390 96 ntBASIC1.76□□□□□ -2.13
PEX3P56589 BX510359.4-201ENST00000423750 193 ntBASIC1.76□□□□□ -2.13
PEX3P56589 MTCO3P29-201ENST00000432119 779 ntBASIC1.76□□□□□ -2.13
PEX3P56589 AC009237.7-201ENST00000447357 229 ntBASIC1.76□□□□□ -2.13
PEX3P56589 Y_RNA.635-201ENST00000459041 101 ntBASIC1.76□□□□□ -2.13
PEX3P56589 RN7SKP210-201ENST00000459176 261 ntBASIC1.76□□□□□ -2.13
PEX3P56589 RPL7P42-201ENST00000481005 679 ntBASIC1.76□□□□□ -2.13
PEX3P56589 RNU6-875P-201ENST00000516488 106 ntBASIC1.76□□□□□ -2.13
PEX3P56589 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.76□□□□□ -2.13
PEX3P56589 MIR548S-201ENST00000581352 82 ntBASIC1.76□□□□□ -2.13
PEX3P56589 MIR3124-201ENST00000582636 67 ntBASIC1.76□□□□□ -2.13
PEX3P56589 AL132765.2-201ENST00000610812 351 ntBASIC1.76□□□□□ -2.13
PEX3P56589 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.76□□□□□ -2.13
PEX3P56589 TCL6_2.1-201ENST00000615162 119 ntBASIC1.76□□□□□ -2.13
PEX3P56589 AC022513.1-201ENST00000624512 117 ntBASIC1.76□□□□□ -2.13
PEX3P56589 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.76□□□□□ -2.13
PEX3P56589 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
PEX3P56589 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
PEX3P56589 Y_RNA.48-201ENST00000362710 103 ntBASIC1.75□□□□□ -2.13
PEX3P56589 Y_RNA.142-201ENST00000363491 102 ntBASIC1.75□□□□□ -2.13
PEX3P56589 SNORD114-6-201ENST00000364393 72 ntBASIC1.75□□□□□ -2.13
PEX3P56589 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.75□□□□□ -2.13
PEX3P56589 MIR32-201ENST00000384965 70 ntBASIC1.75□□□□□ -2.13
PEX3P56589 MIR153-2-201ENST00000385225 87 ntBASIC1.75□□□□□ -2.13
PEX3P56589 RNA5SP504-201ENST00000410676 117 ntBASIC1.75□□□□□ -2.13
PEX3P56589 USMG5P1-201ENST00000425964 177 ntBASIC1.75□□□□□ -2.13
PEX3P56589 MTATP6P23-201ENST00000440153 476 ntBASIC1.75□□□□□ -2.13
PEX3P56589 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.75□□□□□ -2.13
PEX3P56589 MTCO1P44-201ENST00000441935 243 ntBASIC1.75□□□□□ -2.13
PEX3P56589 MTCO3P8-201ENST00000453691 755 ntBASIC1.75□□□□□ -2.13
PEX3P56589 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.75□□□□□ -2.13
PEX3P56589 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.75□□□□□ -2.13
PEX3P56589 RNU6-58P-201ENST00000517143 103 ntBASIC1.75□□□□□ -2.13
PEX3P56589 AL590705.4-201ENST00000532209 134 ntBASIC1.75□□□□□ -2.13
PEX3P56589 MIR3169-201ENST00000578032 83 ntBASIC1.75□□□□□ -2.13
PEX3P56589 MIR4529-201ENST00000578110 78 ntBASIC1.75□□□□□ -2.13
PEX3P56589 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.75□□□□□ -2.13
PEX3P56589 AC008873.1-201ENST00000625051 138 ntBASIC1.75□□□□□ -2.13
PEX3P56589 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.75□□□□□ -2.13
PEX3P56589 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.75□□□□□ -2.13
PEX3P56589 RNU6-1188P-201ENST00000363795 107 ntBASIC1.74□□□□□ -2.13
PEX3P56589 Y_RNA.319-201ENST00000365138 92 ntBASIC1.74□□□□□ -2.13
PEX3P56589 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
PEX3P56589 SNORA75.4-201ENST00000391278 119 ntBASIC1.74□□□□□ -2.13
PEX3P56589 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.74□□□□□ -2.13
PEX3P56589 MTND2P29-201ENST00000438595 412 ntBASIC1.74□□□□□ -2.13
PEX3P56589 AC004386.2-201ENST00000441858 148 ntBASIC1.74□□□□□ -2.13
PEX3P56589 RNU1-131P-201ENST00000458943 161 ntBASIC1.74□□□□□ -2.13
PEX3P56589 RNU7-14P-201ENST00000459331 62 ntBASIC1.74□□□□□ -2.13
PEX3P56589 AC010531.2-201ENST00000465012 153 ntBASIC1.74□□□□□ -2.13
PEX3P56589 RNU5F-4P-201ENST00000516581 114 ntBASIC1.74□□□□□ -2.13
PEX3P56589 RNA5SP54-201ENST00000516951 92 ntBASIC1.74□□□□□ -2.13
PEX3P56589 RNU6-1213P-201ENST00000517075 94 ntBASIC1.74□□□□□ -2.13
PEX3P56589 APOOP3-201ENST00000536787 586 ntBASIC1.74□□□□□ -2.13
PEX3P56589 HSBP1P1-201ENST00000555205 166 ntBASIC1.74□□□□□ -2.13
PEX3P56589 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.74□□□□□ -2.13
PEX3P56589 MIR4287-201ENST00000579398 78 ntBASIC1.74□□□□□ -2.13
PEX3P56589 MIR4273-201ENST00000582824 84 ntBASIC1.74□□□□□ -2.13
PEX3P56589 MIR4769-201ENST00000584126 77 ntBASIC1.74□□□□□ -2.13
PEX3P56589 AC005034.5-201ENST00000604219 466 ntBASIC1.74□□□□□ -2.13
PEX3P56589 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.74□□□□□ -2.13
PEX3P56589 AL669831.3-213ENST00000636676 183 ntBASIC1.74□□□□□ -2.13
PEX3P56589 LINC02555-201ENST00000563933 1951 ntBASIC1.74□□□□□ -2.13
PEX3P56589 RNU6-874P-201ENST00000362390 105 ntBASIC1.73□□□□□ -2.13
PEX3P56589 RNU1-58P-201ENST00000362413 163 ntBASIC1.73□□□□□ -2.13
PEX3P56589 RNU6-457P-201ENST00000363999 107 ntBASIC1.73□□□□□ -2.13
PEX3P56589 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
PEX3P56589 Y_RNA.405-201ENST00000383979 100 ntBASIC1.73□□□□□ -2.13
PEX3P56589 RNU6-245P-201ENST00000384020 107 ntBASIC1.73□□□□□ -2.13
PEX3P56589 Y_RNA.451-201ENST00000384200 100 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms