Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC243428.1-201ENST00000421099 264 ntBASIC1.45□□□□□ -2.18
LIM2P55344 AC069257.2-201ENST00000441819 155 ntBASIC1.45□□□□□ -2.18
LIM2P55344 MTCO3P8-201ENST00000453691 755 ntBASIC1.45□□□□□ -2.18
LIM2P55344 SNORD5.1-201ENST00000458800 75 ntBASIC1.45□□□□□ -2.18
LIM2P55344 HMGN2P9-201ENST00000476875 229 ntBASIC1.45□□□□□ -2.18
LIM2P55344 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LIM2P55344 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.45□□□□□ -2.18
LIM2P55344 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.45□□□□□ -2.18
LIM2P55344 RNU6-718P-201ENST00000516166 105 ntBASIC1.45□□□□□ -2.18
LIM2P55344 RRN3P3-201ENST00000549207 578 ntBASIC1.45□□□□□ -2.18
LIM2P55344 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
LIM2P55344 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.45□□□□□ -2.18
LIM2P55344 MIR4524B-201ENST00000581569 115 ntBASIC1.45□□□□□ -2.18
LIM2P55344 AC060780.3-201ENST00000589464 80 ntBASIC1.45□□□□□ -2.18
LIM2P55344 uc_338.5-201ENST00000611839 155 ntBASIC1.45□□□□□ -2.18
LIM2P55344 AC007014.2-201ENST00000615581 479 ntBASIC1.45□□□□□ -2.18
LIM2P55344 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
LIM2P55344 ZNF299P-201ENST00000406845 1804 ntBASIC1.45□□□□□ -2.18
LIM2P55344 RNU6-545P-201ENST00000362681 104 ntBASIC1.44□□□□□ -2.18
LIM2P55344 Y_RNA.319-201ENST00000365138 92 ntBASIC1.44□□□□□ -2.18
LIM2P55344 RNU6-17P-201ENST00000384245 107 ntBASIC1.44□□□□□ -2.18
LIM2P55344 SNORA67.2-201ENST00000384300 149 ntBASIC1.44□□□□□ -2.18
LIM2P55344 Y_RNA.505-201ENST00000384489 102 ntBASIC1.44□□□□□ -2.18
LIM2P55344 RNU6-18P-201ENST00000384527 107 ntBASIC1.44□□□□□ -2.18
LIM2P55344 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
LIM2P55344 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
LIM2P55344 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.44□□□□□ -2.18
LIM2P55344 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
LIM2P55344 RPS20P15-201ENST00000412792 311 ntBASIC1.44□□□□□ -2.18
LIM2P55344 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.44□□□□□ -2.18
LIM2P55344 CST2P1-201ENST00000425770 87 ntBASIC1.44□□□□□ -2.18
LIM2P55344 MTATP6P13-201ENST00000438531 667 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.44□□□□□ -2.18
LIM2P55344 RNU6-329P-201ENST00000459618 107 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC027575.1-201ENST00000481064 460 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC092989.1-201ENST00000481235 277 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC008834.1-201ENST00000511612 175 ntBASIC1.44□□□□□ -2.18
LIM2P55344 RNU6-1088P-201ENST00000516850 104 ntBASIC1.44□□□□□ -2.18
LIM2P55344 RNU6-58P-201ENST00000517143 103 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.44□□□□□ -2.18
LIM2P55344 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.44□□□□□ -2.18
LIM2P55344 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.44□□□□□ -2.18
LIM2P55344 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.44□□□□□ -2.18
LIM2P55344 BNIP3P10-201ENST00000605360 577 ntBASIC1.44□□□□□ -2.18
LIM2P55344 SNORD11B-201ENST00000607707 90 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC083806.3-201ENST00000614016 455 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC009248.2-201ENST00000619826 254 ntBASIC1.44□□□□□ -2.18
LIM2P55344 AC098679.4-201ENST00000624241 654 ntBASIC1.44□□□□□ -2.18
LIM2P55344 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.44□□□□□ -2.18
LIM2P55344 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
LIM2P55344 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
LIM2P55344 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
LIM2P55344 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
LIM2P55344 RNU6-112P-201ENST00000363599 104 ntBASIC1.43□□□□□ -2.18
LIM2P55344 RNU6-280P-201ENST00000364145 104 ntBASIC1.43□□□□□ -2.18
LIM2P55344 RNU6-1019P-201ENST00000364424 107 ntBASIC1.43□□□□□ -2.18
LIM2P55344 SNORA72.2-201ENST00000365028 127 ntBASIC1.43□□□□□ -2.18
LIM2P55344 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
LIM2P55344 MIR32-201ENST00000384965 70 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AL356776.1-201ENST00000406574 447 ntBASIC1.43□□□□□ -2.18
LIM2P55344 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
LIM2P55344 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AC004866.1-201ENST00000411748 78 ntBASIC1.43□□□□□ -2.18
LIM2P55344 EBAG9P1-201ENST00000418955 543 ntBASIC1.43□□□□□ -2.18
LIM2P55344 Z82205.1-201ENST00000428456 297 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.43□□□□□ -2.18
LIM2P55344 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.43□□□□□ -2.18
LIM2P55344 RPL30P10-201ENST00000488148 337 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.43□□□□□ -2.18
LIM2P55344 HMGB3P17-201ENST00000504195 649 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.43□□□□□ -2.18
LIM2P55344 RNU4-49P-201ENST00000516080 140 ntBASIC1.43□□□□□ -2.18
LIM2P55344 RNU6-1146P-201ENST00000516282 102 ntBASIC1.43□□□□□ -2.18
LIM2P55344 RNU6-358P-201ENST00000516564 75 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AC134698.4-201ENST00000523451 826 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AC027288.2-201ENST00000553028 243 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.43□□□□□ -2.18
LIM2P55344 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.43□□□□□ -2.18
LIM2P55344 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.43□□□□□ -2.18
LIM2P55344 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.43□□□□□ -2.18
LIM2P55344 AC122108.2-201ENST00000611946 526 ntBASIC1.43□□□□□ -2.18
LIM2P55344 U6atac.1-201ENST00000616025 117 ntBASIC1.43□□□□□ -2.18
LIM2P55344 ZNF204P-201ENST00000416749 2397 ntBASIC1.43□□□□□ -2.18
LIM2P55344 AC027514.1-201ENST00000588561 1603 ntBASIC1.43□□□□□ -2.18
LIM2P55344 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LIM2P55344 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
LIM2P55344 RNU6-595P-201ENST00000363944 107 ntBASIC1.42□□□□□ -2.18
LIM2P55344 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
LIM2P55344 MIR30A-201ENST00000385092 71 ntBASIC1.42□□□□□ -2.18
LIM2P55344 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LIM2P55344 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
LIM2P55344 MIR934-201ENST00000401241 83 ntBASIC1.42□□□□□ -2.18
LIM2P55344 AL117342.1-201ENST00000404861 406 ntBASIC1.42□□□□□ -2.18
LIM2P55344 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.42□□□□□ -2.18
LIM2P55344 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.42□□□□□ -2.18
LIM2P55344 FTH1P12-201ENST00000432137 551 ntBASIC1.42□□□□□ -2.18
LIM2P55344 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.42□□□□□ -2.18
LIM2P55344 MTND5P5-201ENST00000503764 376 ntBASIC1.42□□□□□ -2.18
LIM2P55344 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms