Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MIR4287-201ENST00000579398 78 ntBASIC1.93□□□□□ -2.1
CDH13P55290 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.93□□□□□ -2.1
CDH13P55290 AC092794.2-201ENST00000620933 563 ntBASIC1.93□□□□□ -2.1
CDH13P55290 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
CDH13P55290 AC064859.1-201ENST00000624741 174 ntBASIC1.93□□□□□ -2.1
CDH13P55290 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.93□□□□□ -2.1
CDH13P55290 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
CDH13P55290 RNU6-1305P-201ENST00000364353 104 ntBASIC1.92□□□□□ -2.1
CDH13P55290 Y_RNA.364-201ENST00000365532 101 ntBASIC1.92□□□□□ -2.1
CDH13P55290 SNORA8-201ENST00000384574 139 ntBASIC1.92□□□□□ -2.1
CDH13P55290 RNU6-331P-201ENST00000384724 107 ntBASIC1.92□□□□□ -2.1
CDH13P55290 RNA5SP501-201ENST00000410990 112 ntBASIC1.92□□□□□ -2.1
CDH13P55290 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
CDH13P55290 USP9YP16-201ENST00000430287 407 ntBASIC1.92□□□□□ -2.1
CDH13P55290 MTND5P20-201ENST00000448677 143 ntBASIC1.92□□□□□ -2.1
CDH13P55290 USP9YP23-201ENST00000455085 407 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH13P55290 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.92□□□□□ -2.1
CDH13P55290 RPL17P19-201ENST00000489069 552 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AC091951.2-201ENST00000500762 203 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AC097473.1-201ENST00000508142 408 ntBASIC1.92□□□□□ -2.1
CDH13P55290 FGF7P4-201ENST00000509595 295 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.92□□□□□ -2.1
CDH13P55290 SCARNA16.2-201ENST00000516520 172 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH13P55290 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.92□□□□□ -2.1
CDH13P55290 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AL359757.2-201ENST00000624309 274 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AL078596.1-201ENST00000624856 447 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AC068205.3-201ENST00000636385 468 ntBASIC1.92□□□□□ -2.1
CDH13P55290 AL159152.1-201ENST00000635019 2587 ntBASIC1.92□□□□□ -2.1
CDH13P55290 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
CDH13P55290 Y_RNA.387-201ENST00000383918 102 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNU6-418P-201ENST00000384035 107 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNU6-793P-201ENST00000384233 104 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNA5SP213-201ENST00000391031 106 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNA5SP425-201ENST00000410336 112 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 AC093303.1-201ENST00000514549 295 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNU6-277P-201ENST00000516272 106 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNU6-875P-201ENST00000516488 106 ntBASIC1.91□□□□□ -2.1
CDH13P55290 SUMO2P18-201ENST00000518873 252 ntBASIC1.91□□□□□ -2.1
CDH13P55290 APOOP3-201ENST00000536787 586 ntBASIC1.91□□□□□ -2.1
CDH13P55290 UBL5P4-201ENST00000562584 236 ntBASIC1.91□□□□□ -2.1
CDH13P55290 AC090617.3-201ENST00000573670 475 ntBASIC1.91□□□□□ -2.1
CDH13P55290 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
CDH13P55290 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
CDH13P55290 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
CDH13P55290 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
CDH13P55290 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
CDH13P55290 Y_RNA.106-201ENST00000363189 100 ntBASIC1.9□□□□□ -2.11
CDH13P55290 Y_RNA.179-201ENST00000363844 90 ntBASIC1.9□□□□□ -2.11
CDH13P55290 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH13P55290 RNU6-281P-201ENST00000384212 103 ntBASIC1.9□□□□□ -2.11
CDH13P55290 SNORA75.6-201ENST00000391318 127 ntBASIC1.9□□□□□ -2.11
CDH13P55290 MTCYBP4-201ENST00000401524 249 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AL033519.2-201ENST00000403958 392 ntBASIC1.9□□□□□ -2.11
CDH13P55290 RNU2-20P-201ENST00000410425 191 ntBASIC1.9□□□□□ -2.11
CDH13P55290 RNA5SP504-201ENST00000410676 117 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AC007098.1-201ENST00000420122 367 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AL353997.1-201ENST00000432936 108 ntBASIC1.9□□□□□ -2.11
CDH13P55290 RPL23AP50-201ENST00000434149 455 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
CDH13P55290 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH13P55290 AC096638.1-201ENST00000444678 216 ntBASIC1.9□□□□□ -2.11
CDH13P55290 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
CDH13P55290 RNU6-559P-201ENST00000516151 98 ntBASIC1.9□□□□□ -2.11
CDH13P55290 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.9□□□□□ -2.11
CDH13P55290 MIR1273D-201ENST00000577266 86 ntBASIC1.9□□□□□ -2.11
CDH13P55290 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH13P55290 AL353149.1-201ENST00000610667 244 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AL132765.2-201ENST00000610812 351 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
CDH13P55290 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
CDH13P55290 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
CDH13P55290 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDH13P55290 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CDH13P55290 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH13P55290 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDH13P55290 Y_RNA.70-201ENST00000362886 110 ntBASIC1.89□□□□□ -2.11
CDH13P55290 U3.8-201ENST00000363675 217 ntBASIC1.89□□□□□ -2.11
CDH13P55290 RNA5SP126-201ENST00000365092 109 ntBASIC1.89□□□□□ -2.11
CDH13P55290 RNY3P14-201ENST00000384309 102 ntBASIC1.89□□□□□ -2.11
CDH13P55290 RNU6-1297P-201ENST00000384415 104 ntBASIC1.89□□□□□ -2.11
CDH13P55290 RNU6-1009P-201ENST00000390996 107 ntBASIC1.89□□□□□ -2.11
CDH13P55290 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms