Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC019193.3-201ENST00000609144 554 ntBASIC1.72□□□□□ -2.13
VCPP55072 AC093913.1-201ENST00000614178 329 ntBASIC1.72□□□□□ -2.13
VCPP55072 AL157834.3-201ENST00000615543 103 ntBASIC1.72□□□□□ -2.13
VCPP55072 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.72□□□□□ -2.13
VCPP55072 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.72□□□□□ -2.13
VCPP55072 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.72□□□□□ -2.13
VCPP55072 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.72□□□□□ -2.13
VCPP55072 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
VCPP55072 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
VCPP55072 MIR126-201ENST00000362291 85 ntBASIC1.71□□□□□ -2.14
VCPP55072 RNU6-60P-201ENST00000364792 103 ntBASIC1.71□□□□□ -2.14
VCPP55072 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
VCPP55072 Y_RNA.332-201ENST00000365271 113 ntBASIC1.71□□□□□ -2.14
VCPP55072 RNU6-53P-201ENST00000365367 106 ntBASIC1.71□□□□□ -2.14
VCPP55072 RNU6-1013P-201ENST00000384180 107 ntBASIC1.71□□□□□ -2.14
VCPP55072 Y_RNA.505-201ENST00000384489 102 ntBASIC1.71□□□□□ -2.14
VCPP55072 MIR517A-201ENST00000385001 87 ntBASIC1.71□□□□□ -2.14
VCPP55072 Y_RNA.619-201ENST00000410951 90 ntBASIC1.71□□□□□ -2.14
VCPP55072 RPS26P42-201ENST00000413485 326 ntBASIC1.71□□□□□ -2.14
VCPP55072 DAP3P1-201ENST00000441522 278 ntBASIC1.71□□□□□ -2.14
VCPP55072 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.71□□□□□ -2.14
VCPP55072 AF186996.7-201ENST00000492781 209 ntBASIC1.71□□□□□ -2.14
VCPP55072 MTCO2P30-201ENST00000503662 364 ntBASIC1.71□□□□□ -2.14
VCPP55072 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.71□□□□□ -2.14
VCPP55072 RNU5F-4P-201ENST00000516581 114 ntBASIC1.71□□□□□ -2.14
VCPP55072 RNU6-1088P-201ENST00000516850 104 ntBASIC1.71□□□□□ -2.14
VCPP55072 AF235103.2-201ENST00000525753 346 ntBASIC1.71□□□□□ -2.14
VCPP55072 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.71□□□□□ -2.14
VCPP55072 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.71□□□□□ -2.14
VCPP55072 POLR3GP2-201ENST00000588366 668 ntBASIC1.71□□□□□ -2.14
VCPP55072 AC018638.8-201ENST00000588755 281 ntBASIC1.71□□□□□ -2.14
VCPP55072 RMST_6.1-201ENST00000611980 203 ntBASIC1.71□□□□□ -2.14
VCPP55072 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.71□□□□□ -2.14
VCPP55072 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
VCPP55072 RNU1-76P-201ENST00000362903 159 ntBASIC1.7□□□□□ -2.14
VCPP55072 SNORD50.1-201ENST00000362987 71 ntBASIC1.7□□□□□ -2.14
VCPP55072 Y_RNA.86-201ENST00000363020 111 ntBASIC1.7□□□□□ -2.14
VCPP55072 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
VCPP55072 RNU6-174P-201ENST00000410406 106 ntBASIC1.7□□□□□ -2.14
VCPP55072 NFU1P2-201ENST00000448700 469 ntBASIC1.7□□□□□ -2.14
VCPP55072 FGF7P6-202ENST00000451282 293 ntBASIC1.7□□□□□ -2.14
VCPP55072 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.7□□□□□ -2.14
VCPP55072 RNU7-14P-201ENST00000459331 62 ntBASIC1.7□□□□□ -2.14
VCPP55072 AC069439.1-201ENST00000494739 167 ntBASIC1.7□□□□□ -2.14
VCPP55072 RPS23P5-201ENST00000495419 428 ntBASIC1.7□□□□□ -2.14
VCPP55072 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.7□□□□□ -2.14
VCPP55072 RNU4-49P-201ENST00000516080 140 ntBASIC1.7□□□□□ -2.14
VCPP55072 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.7□□□□□ -2.14
VCPP55072 AP003465.2-201ENST00000602571 373 ntBASIC1.7□□□□□ -2.14
VCPP55072 AC124303.1-201ENST00000605703 360 ntBASIC1.7□□□□□ -2.14
VCPP55072 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.7□□□□□ -2.14
VCPP55072 AC091895.1-201ENST00000624494 256 ntBASIC1.7□□□□□ -2.14
VCPP55072 AC095038.3-201ENST00000634439 195 ntBASIC1.7□□□□□ -2.14
VCPP55072 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VCPP55072 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VCPP55072 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VCPP55072 MIR96-201ENST00000362288 78 ntBASIC1.69□□□□□ -2.14
VCPP55072 Y_RNA.301-201ENST00000364990 103 ntBASIC1.69□□□□□ -2.14
VCPP55072 RNU6-438P-201ENST00000365561 103 ntBASIC1.69□□□□□ -2.14
VCPP55072 SNORA18.2-201ENST00000383865 132 ntBASIC1.69□□□□□ -2.14
VCPP55072 RNU6-342P-201ENST00000384521 104 ntBASIC1.69□□□□□ -2.14
VCPP55072 RNU6-160P-201ENST00000384591 107 ntBASIC1.69□□□□□ -2.14
VCPP55072 Y_RNA.599-201ENST00000410489 109 ntBASIC1.69□□□□□ -2.14
VCPP55072 AC123900.1-201ENST00000420390 96 ntBASIC1.69□□□□□ -2.14
VCPP55072 SNRPEP8-201ENST00000442866 260 ntBASIC1.69□□□□□ -2.14
VCPP55072 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.69□□□□□ -2.14
VCPP55072 OR2AQ1P-201ENST00000451972 200 ntBASIC1.69□□□□□ -2.14
VCPP55072 AC079354.2-201ENST00000453523 154 ntBASIC1.69□□□□□ -2.14
VCPP55072 AC087477.1-201ENST00000465747 340 ntBASIC1.69□□□□□ -2.14
VCPP55072 RPL23AP75-201ENST00000491601 451 ntBASIC1.69□□□□□ -2.14
VCPP55072 ACA59.1-201ENST00000515966 143 ntBASIC1.69□□□□□ -2.14
VCPP55072 RNA5SP454-201ENST00000517231 127 ntBASIC1.69□□□□□ -2.14
VCPP55072 MTND4LP26-201ENST00000518144 282 ntBASIC1.69□□□□□ -2.14
VCPP55072 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.69□□□□□ -2.14
VCPP55072 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
VCPP55072 MIR4421-201ENST00000578133 69 ntBASIC1.69□□□□□ -2.14
VCPP55072 SNORA59B-202ENST00000578183 701 ntBASIC1.69□□□□□ -2.14
VCPP55072 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.69□□□□□ -2.14
VCPP55072 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.69□□□□□ -2.14
VCPP55072 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.69□□□□□ -2.14
VCPP55072 AC130454.1-201ENST00000622948 401 ntBASIC1.69□□□□□ -2.14
VCPP55072 SNORD114-6-201ENST00000364393 72 ntBASIC1.68□□□□□ -2.14
VCPP55072 SNORD31B-201ENST00000364977 69 ntBASIC1.68□□□□□ -2.14
VCPP55072 Y_RNA.354-201ENST00000365448 111 ntBASIC1.68□□□□□ -2.14
VCPP55072 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
VCPP55072 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.68□□□□□ -2.14
VCPP55072 RN7SKP101-201ENST00000411376 320 ntBASIC1.68□□□□□ -2.14
VCPP55072 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.68□□□□□ -2.14
VCPP55072 AL035666.1-201ENST00000446195 348 ntBASIC1.68□□□□□ -2.14
VCPP55072 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.68□□□□□ -2.14
VCPP55072 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.68□□□□□ -2.14
VCPP55072 RNU6-970P-201ENST00000516312 107 ntBASIC1.68□□□□□ -2.14
VCPP55072 RNU6-566P-201ENST00000516790 107 ntBASIC1.68□□□□□ -2.14
VCPP55072 RNU1-92P-201ENST00000517017 135 ntBASIC1.68□□□□□ -2.14
VCPP55072 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.68□□□□□ -2.14
VCPP55072 DEFB131C-201ENST00000528817 165 ntBASIC1.68□□□□□ -2.14
VCPP55072 AC015720.1-201ENST00000565251 277 ntBASIC1.68□□□□□ -2.14
VCPP55072 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.68□□□□□ -2.14
VCPP55072 AC016727.2-201ENST00000603988 621 ntBASIC1.68□□□□□ -2.14
VCPP55072 AC016925.2-201ENST00000605108 242 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms