Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 EIF4A1P12-201ENST00000551910 141 ntBASIC2.67□□□□□ -1.98
COPB1P53618 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.67□□□□□ -1.98
COPB1P53618 Y_RNA.772-201ENST00000606692 102 ntBASIC2.67□□□□□ -1.98
COPB1P53618 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.67□□□□□ -1.98
COPB1P53618 RNU1-72P-201ENST00000362976 153 ntBASIC2.66□□□□□ -1.98
COPB1P53618 Y_RNA.143-201ENST00000363520 106 ntBASIC2.66□□□□□ -1.98
COPB1P53618 RNU6-1180P-201ENST00000364935 107 ntBASIC2.66□□□□□ -1.98
COPB1P53618 Y_RNA.461-201ENST00000384263 103 ntBASIC2.66□□□□□ -1.98
COPB1P53618 Y_RNA.483-201ENST00000384380 101 ntBASIC2.66□□□□□ -1.98
COPB1P53618 MICF-203ENST00000432679 129 ntBASIC2.66□□□□□ -1.98
COPB1P53618 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.66□□□□□ -1.98
COPB1P53618 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.66□□□□□ -1.98
COPB1P53618 AC145146.1-201ENST00000496370 254 ntBASIC2.66□□□□□ -1.98
COPB1P53618 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.66□□□□□ -1.98
COPB1P53618 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.66□□□□□ -1.98
COPB1P53618 AC110588.1-201ENST00000559699 137 ntBASIC2.66□□□□□ -1.98
COPB1P53618 AC103810.1-201ENST00000579873 453 ntBASIC2.66□□□□□ -1.98
COPB1P53618 MIR4300-201ENST00000581016 96 ntBASIC2.66□□□□□ -1.98
COPB1P53618 AC062037.2-201ENST00000610137 73 ntBASIC2.66□□□□□ -1.98
COPB1P53618 ZNF271P-202ENST00000465539 1970 ntBASIC2.66□□□□□ -1.98
COPB1P53618 LINC02555-201ENST00000563933 1951 ntBASIC2.66□□□□□ -1.98
COPB1P53618 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COPB1P53618 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
COPB1P53618 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
COPB1P53618 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
COPB1P53618 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
COPB1P53618 snoU2_19.2-201ENST00000363024 80 ntBASIC2.65□□□□□ -1.99
COPB1P53618 RNU6-245P-201ENST00000384020 107 ntBASIC2.65□□□□□ -1.99
COPB1P53618 RNU6-926P-201ENST00000384075 107 ntBASIC2.65□□□□□ -1.99
COPB1P53618 MIR518C-201ENST00000384822 101 ntBASIC2.65□□□□□ -1.99
COPB1P53618 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
COPB1P53618 MIR1302-6-201ENST00000408466 90 ntBASIC2.65□□□□□ -1.99
COPB1P53618 Y_RNA.618-201ENST00000410949 107 ntBASIC2.65□□□□□ -1.99
COPB1P53618 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.65□□□□□ -1.99
COPB1P53618 AC010095.1-201ENST00000443543 144 ntBASIC2.65□□□□□ -1.99
COPB1P53618 TRBV12-1-201ENST00000479785 344 ntBASIC2.65□□□□□ -1.99
COPB1P53618 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.65□□□□□ -1.99
COPB1P53618 RNA5SP112-201ENST00000515937 99 ntBASIC2.65□□□□□ -1.99
COPB1P53618 RPPH1-2P-201ENST00000516688 293 ntBASIC2.65□□□□□ -1.99
COPB1P53618 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.65□□□□□ -1.99
COPB1P53618 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.65□□□□□ -1.99
COPB1P53618 AC023157.2-201ENST00000540596 141 ntBASIC2.65□□□□□ -1.99
COPB1P53618 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.65□□□□□ -1.99
COPB1P53618 AC010999.1-201ENST00000611856 324 ntBASIC2.65□□□□□ -1.99
COPB1P53618 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.65□□□□□ -1.99
COPB1P53618 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.65□□□□□ -1.99
COPB1P53618 AL357075.2-201ENST00000614906 189 ntBASIC2.65□□□□□ -1.99
COPB1P53618 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.65□□□□□ -1.99
COPB1P53618 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
COPB1P53618 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
COPB1P53618 AC026241.1-201ENST00000517873 2142 ntBASIC2.65□□□□□ -1.99
COPB1P53618 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COPB1P53618 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COPB1P53618 snoU2_19.1-201ENST00000362361 80 ntBASIC2.64□□□□□ -1.99
COPB1P53618 U3.9-201ENST00000363823 204 ntBASIC2.64□□□□□ -1.99
COPB1P53618 SNORA68.1-201ENST00000364537 132 ntBASIC2.64□□□□□ -1.99
COPB1P53618 SNORD63-201ENST00000384262 68 ntBASIC2.64□□□□□ -1.99
COPB1P53618 MIR215-201ENST00000384858 110 ntBASIC2.64□□□□□ -1.99
COPB1P53618 SNORA46.1-201ENST00000391069 153 ntBASIC2.64□□□□□ -1.99
COPB1P53618 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.64□□□□□ -1.99
COPB1P53618 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.64□□□□□ -1.99
COPB1P53618 CBX3P6-201ENST00000430257 527 ntBASIC2.64□□□□□ -1.99
COPB1P53618 CR769767.1-201ENST00000436337 346 ntBASIC2.64□□□□□ -1.99
COPB1P53618 AC007395.1-201ENST00000451333 677 ntBASIC2.64□□□□□ -1.99
COPB1P53618 SNORD127-201ENST00000458892 86 ntBASIC2.64□□□□□ -1.99
COPB1P53618 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.64□□□□□ -1.99
COPB1P53618 SNORA25.14-201ENST00000516481 132 ntBASIC2.64□□□□□ -1.99
COPB1P53618 DEFB131C-201ENST00000528817 165 ntBASIC2.64□□□□□ -1.99
COPB1P53618 MIR4423-201ENST00000580922 80 ntBASIC2.64□□□□□ -1.99
COPB1P53618 RPL30P11-203ENST00000598995 310 ntBASIC2.64□□□□□ -1.99
COPB1P53618 MZT1P2-201ENST00000604387 248 ntBASIC2.64□□□□□ -1.99
COPB1P53618 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.64□□□□□ -1.99
COPB1P53618 AC067747.1-201ENST00000608026 250 ntBASIC2.64□□□□□ -1.99
COPB1P53618 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.64□□□□□ -1.99
COPB1P53618 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.64□□□□□ -1.99
COPB1P53618 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COPB1P53618 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
COPB1P53618 RNU1-62P-201ENST00000362599 164 ntBASIC2.63□□□□□ -1.99
COPB1P53618 Y_RNA.84-201ENST00000363011 104 ntBASIC2.63□□□□□ -1.99
COPB1P53618 RNU6-486P-201ENST00000363116 107 ntBASIC2.63□□□□□ -1.99
COPB1P53618 RNU6-961P-201ENST00000363893 105 ntBASIC2.63□□□□□ -1.99
COPB1P53618 Y_RNA.288-201ENST00000364854 92 ntBASIC2.63□□□□□ -1.99
COPB1P53618 RNU6-937P-201ENST00000384325 106 ntBASIC2.63□□□□□ -1.99
COPB1P53618 RNU2-20P-201ENST00000410425 191 ntBASIC2.63□□□□□ -1.99
COPB1P53618 RNU6-1203P-201ENST00000410703 110 ntBASIC2.63□□□□□ -1.99
COPB1P53618 AC004866.1-201ENST00000411748 78 ntBASIC2.63□□□□□ -1.99
COPB1P53618 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.63□□□□□ -1.99
COPB1P53618 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.63□□□□□ -1.99
COPB1P53618 AC091179.3-201ENST00000474761 144 ntBASIC2.63□□□□□ -1.99
COPB1P53618 SNORA40.9-201ENST00000515895 93 ntBASIC2.63□□□□□ -1.99
COPB1P53618 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.63□□□□□ -1.99
COPB1P53618 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.63□□□□□ -1.99
COPB1P53618 MIR376A1-201ENST00000616574 68 ntBASIC2.63□□□□□ -1.99
COPB1P53618 MIR7515-201ENST00000637837 67 ntBASIC2.63□□□□□ -1.99
COPB1P53618 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
COPB1P53618 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COPB1P53618 MTND5P35-201ENST00000557537 1720 ntBASIC2.62□□□□□ -1.99
COPB1P53618 AC010329.5-201ENST00000623497 2174 ntBASIC2.62□□□□□ -1.99
COPB1P53618 RNU5F-3P-201ENST00000363767 117 ntBASIC2.62□□□□□ -1.99
COPB1P53618 Y_RNA.179-201ENST00000363844 90 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms