Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
RPL28P46779 RNU7-21P-201ENST00000459430 62 ntBASIC0.41□□□□□ -2.34
RPL28P46779 AL137161.1-201ENST00000532231 390 ntBASIC0.41□□□□□ -2.34
RPL28P46779 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.41□□□□□ -2.34
RPL28P46779 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.41□□□□□ -2.34
RPL28P46779 AC025449.1-201ENST00000603896 529 ntBASIC0.41□□□□□ -2.34
RPL28P46779 SNRPGP20-201ENST00000604477 205 ntBASIC0.41□□□□□ -2.34
RPL28P46779 AL353765.1-201ENST00000605514 183 ntBASIC0.41□□□□□ -2.34
RPL28P46779 AC104465.1-201ENST00000611365 139 ntBASIC0.41□□□□□ -2.34
RPL28P46779 AP001506.1-201ENST00000615444 211 ntBASIC0.41□□□□□ -2.34
RPL28P46779 uc_338.17-201ENST00000619633 179 ntBASIC0.41□□□□□ -2.34
RPL28P46779 AC018630.2-201ENST00000534866 2403 ntBASIC0.4□□□□□ -2.34
RPL28P46779 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.4□□□□□ -2.34
RPL28P46779 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
RPL28P46779 RNU6-199P-201ENST00000362954 107 ntBASIC0.4□□□□□ -2.35
RPL28P46779 RNU1-93P-201ENST00000364704 169 ntBASIC0.4□□□□□ -2.35
RPL28P46779 SNORD73A-201ENST00000386062 65 ntBASIC0.4□□□□□ -2.35
RPL28P46779 MIR1276-201ENST00000408707 83 ntBASIC0.4□□□□□ -2.35
RPL28P46779 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.4□□□□□ -2.35
RPL28P46779 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.4□□□□□ -2.35
RPL28P46779 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.4□□□□□ -2.35
RPL28P46779 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.4□□□□□ -2.35
RPL28P46779 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.4□□□□□ -2.35
RPL28P46779 RNU7-138P-201ENST00000459479 64 ntBASIC0.4□□□□□ -2.35
RPL28P46779 SNORD11.1-201ENST00000459482 85 ntBASIC0.4□□□□□ -2.35
RPL28P46779 RNU6-1037P-201ENST00000459571 107 ntBASIC0.4□□□□□ -2.35
RPL28P46779 AC025465.4-201ENST00000513422 638 ntBASIC0.4□□□□□ -2.35
RPL28P46779 RNU6-344P-201ENST00000516635 111 ntBASIC0.4□□□□□ -2.35
RPL28P46779 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.4□□□□□ -2.35
RPL28P46779 CYP3A137P-201ENST00000562436 69 ntBASIC0.4□□□□□ -2.35
RPL28P46779 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.4□□□□□ -2.35
RPL28P46779 MIR4778-201ENST00000577635 80 ntBASIC0.4□□□□□ -2.35
RPL28P46779 AC245014.2-201ENST00000603689 287 ntBASIC0.4□□□□□ -2.35
RPL28P46779 AC246785.4-201ENST00000605374 287 ntBASIC0.4□□□□□ -2.35
RPL28P46779 U2.17-201ENST00000611454 95 ntBASIC0.4□□□□□ -2.35
RPL28P46779 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.4□□□□□ -2.35
RPL28P46779 AL078596.1-201ENST00000624856 447 ntBASIC0.4□□□□□ -2.35
RPL28P46779 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
RPL28P46779 MIR373-201ENST00000362273 69 ntBASIC0.39□□□□□ -2.35
RPL28P46779 RNU6-282P-201ENST00000365357 103 ntBASIC0.39□□□□□ -2.35
RPL28P46779 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
RPL28P46779 RNU6-903P-201ENST00000391270 109 ntBASIC0.39□□□□□ -2.35
RPL28P46779 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
RPL28P46779 AL451046.2-201ENST00000403074 277 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AL355796.1-201ENST00000406706 323 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AL035398.1-201ENST00000430869 322 ntBASIC0.39□□□□□ -2.35
RPL28P46779 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AC098869.1-201ENST00000481627 292 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.39□□□□□ -2.35
RPL28P46779 RNU6-947P-201ENST00000516264 106 ntBASIC0.39□□□□□ -2.35
RPL28P46779 RNU6-917P-201ENST00000516294 104 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.39□□□□□ -2.35
RPL28P46779 AP003484.1-201ENST00000530974 250 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.39□□□□□ -2.35
RPL28P46779 AC007834.2-201ENST00000536310 343 ntBASIC0.39□□□□□ -2.35
RPL28P46779 MIR4452-201ENST00000583004 71 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AL357312.1-201ENST00000603879 298 ntBASIC0.39□□□□□ -2.35
RPL28P46779 PRELID3BP2-201ENST00000605362 201 ntBASIC0.39□□□□□ -2.35
RPL28P46779 MIR8070-201ENST00000616510 88 ntBASIC0.39□□□□□ -2.35
RPL28P46779 U6.73-201ENST00000619194 103 ntBASIC0.39□□□□□ -2.35
RPL28P46779 AC068792.1-201ENST00000621354 417 ntBASIC0.39□□□□□ -2.35
RPL28P46779 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.39□□□□□ -2.35
RPL28P46779 SCARNA4-201ENST00000629045 128 ntBASIC0.39□□□□□ -2.35
RPL28P46779 MIR6767-201ENST00000637302 66 ntBASIC0.39□□□□□ -2.35
RPL28P46779 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
RPL28P46779 CASC19-280ENST00000642102 1351 ntBASIC0.38□□□□□ -2.35
RPL28P46779 AP000568.1-201ENST00000282964 442 ntBASIC0.38□□□□□ -2.35
RPL28P46779 MIR96-201ENST00000362288 78 ntBASIC0.38□□□□□ -2.35
RPL28P46779 Y_RNA.4-201ENST00000362333 112 ntBASIC0.38□□□□□ -2.35
RPL28P46779 Y_RNA.164-201ENST00000363709 102 ntBASIC0.38□□□□□ -2.35
RPL28P46779 RNU6-925P-201ENST00000384629 104 ntBASIC0.38□□□□□ -2.35
RPL28P46779 SNORA40.3-201ENST00000390964 122 ntBASIC0.38□□□□□ -2.35
RPL28P46779 RNA5SP504-201ENST00000410676 117 ntBASIC0.38□□□□□ -2.35
RPL28P46779 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.38□□□□□ -2.35
RPL28P46779 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.38□□□□□ -2.35
RPL28P46779 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.38□□□□□ -2.35
RPL28P46779 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
RPL28P46779 AL033528.1-201ENST00000453780 140 ntBASIC0.38□□□□□ -2.35
RPL28P46779 RNU7-90P-201ENST00000459216 62 ntBASIC0.38□□□□□ -2.35
RPL28P46779 AF186996.7-201ENST00000492781 209 ntBASIC0.38□□□□□ -2.35
RPL28P46779 RNU7-99P-201ENST00000516271 62 ntBASIC0.38□□□□□ -2.35
RPL28P46779 AC106038.2-201ENST00000520706 568 ntBASIC0.38□□□□□ -2.35
RPL28P46779 AP002963.1-201ENST00000530590 184 ntBASIC0.38□□□□□ -2.35
RPL28P46779 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.38□□□□□ -2.35
RPL28P46779 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.38□□□□□ -2.35
RPL28P46779 AC011458.1-201ENST00000604034 617 ntBASIC0.38□□□□□ -2.35
RPL28P46779 AC009161.2-201ENST00000624626 138 ntBASIC0.38□□□□□ -2.35
RPL28P46779 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
RPL28P46779 AC068700.1-201ENST00000565862 3754 ntBASIC0.37□□□□□ -2.35
RPL28P46779 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
RPL28P46779 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
RPL28P46779 RNU4-12P-201ENST00000365233 139 ntBASIC0.37□□□□□ -2.35
RPL28P46779 SNORD114-22-201ENST00000365423 72 ntBASIC0.37□□□□□ -2.35
RPL28P46779 SNORA2.2-201ENST00000365473 135 ntBASIC0.37□□□□□ -2.35
RPL28P46779 RNU6-456P-201ENST00000384493 107 ntBASIC0.37□□□□□ -2.35
RPL28P46779 MIR520E-201ENST00000384867 87 ntBASIC0.37□□□□□ -2.35
RPL28P46779 SNORA75.2-201ENST00000391138 150 ntBASIC0.37□□□□□ -2.35
RPL28P46779 SNORA75.3-201ENST00000391231 150 ntBASIC0.37□□□□□ -2.35
RPL28P46779 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.37□□□□□ -2.35
RPL28P46779 RNU6-1186P-201ENST00000410429 97 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms