Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NKX2-1P43699 ZNF720P1-201ENST00000562403 1939 ntBASIC1.95□□□□□ -2.1
NKX2-1P43699 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.95□□□□□ -2.1
NKX2-1P43699 ZNF204P-201ENST00000416749 2397 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 RNU6-873P-201ENST00000363833 107 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 Y_RNA.380-201ENST00000365663 111 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 RNU6-318P-201ENST00000384283 103 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 MIR586-201ENST00000385035 97 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 Y_RNA.645-201ENST00000391229 102 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 MIR1262-201ENST00000408276 93 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 Y_RNA.605-201ENST00000410577 105 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 Z92545.1-201ENST00000411782 234 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.94□□□□□ -2.1
NKX2-1P43699 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX2-1P43699 RN7SKP132-201ENST00000516001 208 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 RNU6-1012P-201ENST00000516606 109 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX2-1P43699 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.94□□□□□ -2.1
NKX2-1P43699 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.94□□□□□ -2.1
NKX2-1P43699 AC125232.2-201ENST00000592457 143 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 AC010999.1-201ENST00000611856 324 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 MIR7106-201ENST00000612419 65 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.94□□□□□ -2.1
NKX2-1P43699 AC007485.1-201ENST00000616755 206 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.94□□□□□ -2.1
NKX2-1P43699 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NKX2-1P43699 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.94□□□□□ -2.1
NKX2-1P43699 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
NKX2-1P43699 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX2-1P43699 AL596028.1-201ENST00000326971 197 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 Y_RNA.179-201ENST00000363844 90 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 RNU6-793P-201ENST00000384233 104 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 MIR518A2-201ENST00000384966 87 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 MIR487A-201ENST00000385009 80 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 MIR27B-201ENST00000385129 97 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AC123900.1-201ENST00000420390 96 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AC063976.3-201ENST00000426849 329 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AL160004.2-201ENST00000432935 350 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.93□□□□□ -2.1
NKX2-1P43699 AC004386.2-201ENST00000441858 148 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 IPO7P1-201ENST00000442031 636 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 FCF1P4-201ENST00000448326 183 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.93□□□□□ -2.1
NKX2-1P43699 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.93□□□□□ -2.1
NKX2-1P43699 MTCO3P8-201ENST00000453691 755 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AC016925.1-201ENST00000458303 298 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 RNU1-131P-201ENST00000458943 161 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 SNORD109B-201ENST00000458961 67 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 SNORD109A-201ENST00000459128 67 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 U8.22-201ENST00000459141 133 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 Y_RNA.661-201ENST00000516003 99 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 SNORA25.14-201ENST00000516481 132 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 RNU6-1098P-201ENST00000516772 96 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 IGLV3-17-201ENST00000519099 244 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AP003072.1-201ENST00000531740 145 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 GTF3AP2-201ENST00000557014 266 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.93□□□□□ -2.1
NKX2-1P43699 LARP7P3-201ENST00000579888 337 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.93□□□□□ -2.1
NKX2-1P43699 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX2-1P43699 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX2-1P43699 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX2-1P43699 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.93□□□□□ -2.1
NKX2-1P43699 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.92□□□□□ -2.1
NKX2-1P43699 RNU6-525P-201ENST00000363685 104 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 SNORD14.1-201ENST00000365609 90 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 Y_RNA.551-201ENST00000384661 102 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 RNU6-985P-201ENST00000410182 104 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AC004866.1-201ENST00000411748 78 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AC027124.2-201ENST00000428249 105 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX2-1P43699 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX2-1P43699 RNU7-14P-201ENST00000459331 62 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 MIR449C-201ENST00000516047 92 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 Y_RNA.683-201ENST00000516508 93 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AC121758.2-201ENST00000553271 193 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 EIF4BP1-201ENST00000554881 351 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AC104695.3-201ENST00000604052 296 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AL033523.1-201ENST00000605153 153 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AL121655.1-201ENST00000605811 308 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 SNORD11B-201ENST00000607707 90 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.92□□□□□ -2.1
NKX2-1P43699 AC022202.1-201ENST00000613515 211 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
NKX2-1P43699 AC007742.2-201ENST00000618226 398 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 AC068205.3-201ENST00000636385 468 ntBASIC1.92□□□□□ -2.1
NKX2-1P43699 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU6-222P-201ENST00000362438 107 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 U3.8-201ENST00000363675 217 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU6-743P-201ENST00000364151 106 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 Y_RNA.276-201ENST00000364732 109 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU6-438P-201ENST00000365561 103 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 SNORA18.2-201ENST00000383865 132 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 SNORA6-201ENST00000384033 151 ntBASIC1.91□□□□□ -2.1
NKX2-1P43699 RNU6-639P-201ENST00000384074 107 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms