Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL365203.2-201ENST00000423444 196 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.76□□□□□ -2.29
COL18A1P39060 RNU6-759P-201ENST00000516740 103 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 CYP3A52P-201ENST00000563326 91 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 AGGF1P4-201ENST00000568249 801 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 AC015688.6-201ENST00000577737 104 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 MZT1P2-201ENST00000604387 248 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 CTHRC1P1-201ENST00000605383 469 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 AC008536.2-201ENST00000607284 349 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.76□□□□□ -2.29
COL18A1P39060 AC009033.1-201ENST00000624279 431 ntBASIC0.76□□□□□ -2.29
COL18A1P39060 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.76□□□□□ -2.29
COL18A1P39060 SNORA36A-201ENST00000384221 132 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 MIR515-2-201ENST00000384883 83 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 MIR515-1-201ENST00000384884 83 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 MIR548B-201ENST00000385247 97 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
COL18A1P39060 AC114982.1-201ENST00000469402 321 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 AC091874.1-201ENST00000511402 339 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 RNA5SP404-201ENST00000517118 132 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 MIR4709-201ENST00000577272 72 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 MIR5006-201ENST00000583027 110 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.75□□□□□ -2.29
COL18A1P39060 AC012676.2-201ENST00000619258 186 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.75□□□□□ -2.29
COL18A1P39060 FGF7P2-201ENST00000332473 296 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
COL18A1P39060 Y_RNA.303-201ENST00000364998 94 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 RNU6-968P-201ENST00000384076 107 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 RNU6-297P-201ENST00000384636 107 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 RNU6-950P-201ENST00000384651 107 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.75□□□□□ -2.29
COL18A1P39060 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.75□□□□□ -2.29
COL18A1P39060 AL356010.1-201ENST00000456364 102 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 RNU7-138P-201ENST00000459479 64 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.75□□□□□ -2.29
COL18A1P39060 MTND4P7-201ENST00000523876 130 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 APOOP3-201ENST00000536787 586 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.75□□□□□ -2.29
COL18A1P39060 AL512310.8-201ENST00000550183 120 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.75□□□□□ -2.29
COL18A1P39060 AC025449.1-201ENST00000603896 529 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 SNRPGP20-201ENST00000604477 205 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 AC087683.2-201ENST00000611384 326 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 AC005609.4-201ENST00000625071 447 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 SNORA43.4-201ENST00000629559 138 ntBASIC0.75□□□□□ -2.29
COL18A1P39060 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
COL18A1P39060 RNU6-227P-201ENST00000362865 103 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 RNU6-282P-201ENST00000365357 103 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 RNU6-975P-201ENST00000384296 105 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
COL18A1P39060 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.74□□□□□ -2.29
COL18A1P39060 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.74□□□□□ -2.29
COL18A1P39060 AC074290.1-201ENST00000448883 135 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.74□□□□□ -2.29
COL18A1P39060 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.74□□□□□ -2.29
COL18A1P39060 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.74□□□□□ -2.29
COL18A1P39060 RNU7-40P-201ENST00000516397 64 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 RNU6-323P-201ENST00000521915 107 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.74□□□□□ -2.29
COL18A1P39060 AC024995.1-201ENST00000523014 93 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.74□□□□□ -2.29
COL18A1P39060 AC090115.3-201ENST00000553218 849 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 AL442163.3-201ENST00000554110 156 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.74□□□□□ -2.29
COL18A1P39060 AC091931.1-201ENST00000623488 728 ntBASIC0.74□□□□□ -2.29
COL18A1P39060 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.74□□□□□ -2.29
COL18A1P39060 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
COL18A1P39060 RNA5SP327-201ENST00000362494 101 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 MIR1253-201ENST00000408273 105 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 MIR320B2-201ENST00000408479 138 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 RNU2-9P-201ENST00000410194 145 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.73□□□□□ -2.29
COL18A1P39060 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.73□□□□□ -2.29
COL18A1P39060 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.73□□□□□ -2.29
COL18A1P39060 MTND4P32-201ENST00000437189 1237 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.73□□□□□ -2.29
COL18A1P39060 HMGN1P12-201ENST00000499125 195 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.73□□□□□ -2.29
COL18A1P39060 RN7SKP88-201ENST00000516847 250 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AC026470.2-201ENST00000561492 181 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AL391840.1-201ENST00000571144 367 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 SNORA59B-202ENST00000578183 701 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 MIR3664-201ENST00000579074 99 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AP000907.4-201ENST00000604143 237 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AL365434.2-201ENST00000607979 234 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 7SK.8-201ENST00000612110 250 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 7SK.11-201ENST00000615477 250 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AC087588.2-201ENST00000617667 426 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 7SK.13-201ENST00000622040 250 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 RNU6-222P-201ENST00000362438 107 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 RNU6-331P-201ENST00000384724 107 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
COL18A1P39060 MTATP6P18-201ENST00000417994 673 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 USP9YP14-201ENST00000430663 563 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.73□□□□□ -2.29
COL18A1P39060 C1DP4-201ENST00000455429 424 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 AC091435.1-201ENST00000505442 584 ntBASIC0.73□□□□□ -2.29
COL18A1P39060 UBL5P1-201ENST00000507979 193 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms