Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.22□□□□□ -2.21
FDFT1P37268 ERLEC1P1-201ENST00000433806 578 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.22□□□□□ -2.21
FDFT1P37268 AL603825.1-201ENST00000438481 80 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC073910.1-201ENST00000445047 438 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC009474.2-201ENST00000451383 136 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.22□□□□□ -2.21
FDFT1P37268 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC007215.1-201ENST00000464893 276 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 RPL31P58-201ENST00000469001 379 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.22□□□□□ -2.21
FDFT1P37268 MTND2P38-201ENST00000522536 667 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.22□□□□□ -2.21
FDFT1P37268 AP003465.2-201ENST00000602571 373 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.22□□□□□ -2.21
FDFT1P37268 AC004492.1-201ENST00000607036 742 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC245008.1-201ENST00000608123 476 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC006001.4-201ENST00000622243 395 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 MTND5P35-201ENST00000557537 1720 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 Y_RNA.373-201ENST00000365600 103 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 RNU6-790P-201ENST00000384479 105 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 RNU6-1065P-201ENST00000384513 106 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
FDFT1P37268 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 MIR320B2-201ENST00000408479 138 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 SEPT14P3-201ENST00000439401 183 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 AL732372.2-207ENST00000445840 183 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 AC074290.1-201ENST00000448883 135 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.21□□□□□ -2.22
FDFT1P37268 SEPT14P2-201ENST00000453405 183 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.21□□□□□ -2.22
FDFT1P37268 SEPT14P4-201ENST00000513445 186 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.21□□□□□ -2.22
FDFT1P37268 FO082796.1-201ENST00000523795 183 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.21□□□□□ -2.22
FDFT1P37268 AC137590.2-201ENST00000619709 240 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 SCARNA4-201ENST00000629045 128 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 ZNF204P-201ENST00000416749 2397 ntBASIC1.21□□□□□ -2.22
FDFT1P37268 MIR378A-201ENST00000362177 66 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 snoU2-30.2-201ENST00000362805 70 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 SNORD113-7-201ENST00000363762 77 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 MIR487A-201ENST00000385009 80 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 MIR1253-201ENST00000408273 105 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 RNU6-57P-201ENST00000411348 103 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 COX6CP10-201ENST00000416832 224 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.2□□□□□ -2.22
FDFT1P37268 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.2□□□□□ -2.22
FDFT1P37268 HMGN2P34-201ENST00000437647 269 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 AL353572.1-201ENST00000442490 417 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 snoU13.27-201ENST00000459278 104 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 RNU7-57P-201ENST00000459540 60 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 RPL23AP75-201ENST00000491601 451 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.2□□□□□ -2.22
FDFT1P37268 RNU6-1281P-201ENST00000516223 105 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 Y_RNA.704-201ENST00000516851 102 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 AC016957.1-201ENST00000534895 309 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 AC010525.2-201ENST00000590920 195 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.2□□□□□ -2.22
FDFT1P37268 AL133215.3-201ENST00000609801 448 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.2□□□□□ -2.22
FDFT1P37268 AC068137.3-201ENST00000639191 341 ntBASIC1.2□□□□□ -2.22
FDFT1P37268 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.2□□□□□ -2.22
FDFT1P37268 RNU6-254P-201ENST00000363377 107 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 SNORA72.2-201ENST00000365028 127 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 Y_RNA.372-201ENST00000365599 102 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 RNU6-417P-201ENST00000384712 107 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 MIR586-201ENST00000385035 97 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 RNU6-780P-201ENST00000391030 104 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
FDFT1P37268 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 RNU7-187P-201ENST00000458985 68 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.19□□□□□ -2.22
FDFT1P37268 RNU6-1146P-201ENST00000516282 102 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 RNU1-117P-201ENST00000517041 158 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 AC016727.1-205ENST00000605437 569 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.19□□□□□ -2.22
FDFT1P37268 AL078596.1-201ENST00000624856 447 ntBASIC1.19□□□□□ -2.22
FDFT1P37268 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
FDFT1P37268 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
FDFT1P37268 RNU6-1252P-201ENST00000363054 104 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 Y_RNA.151-201ENST00000363566 112 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 SNORA4.2-201ENST00000365313 147 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 Y_RNA.338-201ENST00000365320 114 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 RNU6-128P-201ENST00000383976 107 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 RNU6-483P-201ENST00000384088 108 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 SNORD116-2-201ENST00000384274 95 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 SNORD116-6-201ENST00000384711 96 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 MIR194-1-201ENST00000384892 85 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 AL590002.1-201ENST00000406554 418 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 MTCO1P20-201ENST00000425366 358 ntBASIC1.18□□□□□ -2.22
FDFT1P37268 Z82205.1-201ENST00000428456 297 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms