Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.59□□□□□ -2.15
CTNNA1P35221 FO393415.2-201ENST00000480085 343 ntBASIC1.59□□□□□ -2.15
CTNNA1P35221 SUB1P3-201ENST00000564581 315 ntBASIC1.59□□□□□ -2.15
CTNNA1P35221 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.59□□□□□ -2.15
CTNNA1P35221 AP003465.2-201ENST00000602571 373 ntBASIC1.59□□□□□ -2.15
CTNNA1P35221 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.59□□□□□ -2.15
CTNNA1P35221 U4.5-201ENST00000617137 123 ntBASIC1.59□□□□□ -2.15
CTNNA1P35221 MTND5P35-201ENST00000557537 1720 ntBASIC1.59□□□□□ -2.16
CTNNA1P35221 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
CTNNA1P35221 Y_RNA.9-201ENST00000362354 101 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 Y_RNA.38-201ENST00000362617 102 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 Y_RNA.100-201ENST00000363141 102 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 RNY4P14-201ENST00000363656 96 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 Y_RNA.373-201ENST00000365600 103 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 RNU6-1065P-201ENST00000384513 106 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 RNA5SP323-201ENST00000391094 133 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 RPL30P13-201ENST00000418873 348 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 ZNF885P-201ENST00000420174 1098 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 Z82205.1-201ENST00000428456 297 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 AC079354.2-201ENST00000453523 154 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.58□□□□□ -2.16
CTNNA1P35221 AC116337.1-201ENST00000509680 687 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 SNORA25.15-201ENST00000516487 89 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 RNA5SP54-201ENST00000516951 92 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 SNORD11B-201ENST00000607707 90 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 AL078604.3-201ENST00000615580 211 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 snoZ196.1-201ENST00000625269 89 ntBASIC1.58□□□□□ -2.16
CTNNA1P35221 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
CTNNA1P35221 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CTNNA1P35221 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CTNNA1P35221 SNORD50.1-201ENST00000362987 71 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 Y_RNA.135-201ENST00000363439 95 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 RNU6-1090P-201ENST00000364065 94 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 RNU6-245P-201ENST00000384020 107 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 SNORA26.9-201ENST00000391322 122 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 MIR1289-2-201ENST00000408360 111 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 Y_RNA.615-201ENST00000410769 117 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 RNU6-373P-201ENST00000411247 98 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 AC008134.1-201ENST00000420943 193 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 DAP3P1-201ENST00000441522 278 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 PCMTD1P1-201ENST00000455560 355 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 AC024995.1-201ENST00000523014 93 ntBASIC1.57□□□□□ -2.16
CTNNA1P35221 RNU6-1252P-201ENST00000363054 104 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 Y_RNA.151-201ENST00000363566 112 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 RNU4-9P-201ENST00000364951 139 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 SNORA67.2-201ENST00000384300 149 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 MIR194-1-201ENST00000384892 85 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.56□□□□□ -2.16
CTNNA1P35221 MTCO3P18-201ENST00000440206 761 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 AC007677.1-201ENST00000445757 515 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.56□□□□□ -2.16
CTNNA1P35221 RPS26P45-201ENST00000471748 340 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 HMGN1P12-201ENST00000499125 195 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.56□□□□□ -2.16
CTNNA1P35221 Y_RNA.675-201ENST00000516389 149 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 AC005668.1-201ENST00000571142 476 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.56□□□□□ -2.16
CTNNA1P35221 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.56□□□□□ -2.16
CTNNA1P35221 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CTNNA1P35221 Y_RNA.3-201ENST00000362331 103 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 SNORD115-8-201ENST00000363856 82 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 RNU1-42P-201ENST00000364033 160 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 Y_RNA.287-201ENST00000364853 94 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 SNORD115-38-201ENST00000365037 82 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 Y_RNA.450-201ENST00000384198 113 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 RNA5SP118-201ENST00000410385 109 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 AC016909.1-201ENST00000415916 166 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 EIF1P1-201ENST00000421436 341 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.55□□□□□ -2.16
CTNNA1P35221 AL589823.1-201ENST00000429577 183 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 MTCO2P30-201ENST00000503662 364 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.55□□□□□ -2.16
CTNNA1P35221 POLR3GP2-201ENST00000588366 668 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 AC012557.2-201ENST00000605919 418 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 AL138726.1-201ENST00000614873 333 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 AC024614.3-201ENST00000637860 256 ntBASIC1.55□□□□□ -2.16
CTNNA1P35221 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CTNNA1P35221 MIR26B-201ENST00000362251 77 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 SNORD115-32-201ENST00000364079 82 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 Y_RNA.414-201ENST00000384011 101 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 RNU6-95P-201ENST00000384697 107 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 MIR32-201ENST00000384965 70 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 AC004965.1-201ENST00000413033 213 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.54□□□□□ -2.16
CTNNA1P35221 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.54□□□□□ -2.16
CTNNA1P35221 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.54□□□□□ -2.16
CTNNA1P35221 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 AP000889.1-201ENST00000530968 660 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.54□□□□□ -2.16
CTNNA1P35221 AC040896.1-201ENST00000613819 479 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 AC006504.8-201ENST00000621046 635 ntBASIC1.54□□□□□ -2.16
CTNNA1P35221 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.54□□□□□ -2.16
CTNNA1P35221 RNU1-62P-201ENST00000362599 164 ntBASIC1.53□□□□□ -2.16
CTNNA1P35221 Y_RNA.212-201ENST00000364177 102 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms